Publications by authors named "Christopher Bystroff"

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Electrostatic potential is the dominant force in antigenic selection of naïve T-cells and B-cells for activation and maturation.
Kripa N Nand, Christopher Bystroff

Immunol Lett· December 2025

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Immobilization and enhancement of a heterodimeric fluorescence biosensor in fibrous protein biomaterials.
Rebecca M Booth, Amanda Jons, Xue Gong, Shounak Banerjee, Britt Faulk, Christopher Bystroff

Protein Sci· May 2025

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Challenges and Solutions for Leave-One-Out Biosensor Design in the Context of a Rugged Fitness Landscape.
Shounak Banerjee, Keith Fraser, Donna E Crone, Jinal C Patel, Sarah E Bondos, Christopher Bystroff

Sensors (Basel)· October 2024

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Correction to "Mispacking and the Fitness Landscape of the Green Fluorescent Protein Chromophore Milieu".
Shounak Banerjee, Christian D Schenkelberg, Thomas B Jordan, Julia M Reimertz, Emily E Crone, Christopher Bystroff

Biochemistry· October 2023

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Footprints to singularity: A global population model explains late 20th century slow-down and predicts peak within ten years.
Christopher Bystroff

PLoS One· October 2021

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Genetic Defects in Underlie Male Infertility With Multiple Morphological Abnormalities of the Sperm Flagella in Humans and Mice.
Jae Yeon Hwang, Shoaib Nawaz, Jungmin Choi, Huafeng Wang, Shabir Hussain, Christopher Bystroff

Front Cell Dev Biol· April 2021

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Better together: Elements of successful scientific software development in a distributed collaborative community.
Julia Koehler Leman, Brian D Weitzner, P Douglas Renfrew, Steven M Lewis, Rocco Moretti, Christopher Bystroff

PLoS Comput Biol· May 2020

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Complex between a Multicrossover DNA Nanostructure, PX-DNA, and T7 Endonuclease I.
Megan Kizer, Ian D Huntress, Benjamin D Walcott, Keith Fraser, Christopher Bystroff

Biochemistry· March 2019

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Fast design of arbitrary length loops in proteins using InteractiveRosetta.
William F Hooper, Benjamin D Walcott, Xing Wang, Christopher Bystroff

BMC Bioinformatics· September 2018

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Intramembranal disulfide cross-linking elucidates the super-quaternary structure of mammalian CatSpers.
Christopher Bystroff

Reprod Biol· March 2018

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Mispacking and the Fitness Landscape of the Green Fluorescent Protein Chromophore Milieu.
Shounak Banerjee, Christian D Schenkelberg, Thomas B Jordan, Julia M Reimertz, Emily E Crone, Christopher Bystroff

Biochemistry· February 2017

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Influence of surface charge, binding site residues and glycosylation on Thielavia terrestris cutinase biochemical characteristics.
Abhijit N Shirke, Danielle Basore, Samantha Holton, An Su, Evan Baugh, Christopher Bystroff

Appl Microbiol Biotechnol· May 2016

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Protein backbone ensemble generation explores the local structural space of unseen natural homologs.
Christian D Schenkelberg, Christopher Bystroff

Bioinformatics· May 2016

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Toward rational thermostabilization of Aspergillus oryzae cutinase: Insights into catalytic and structural stability.
Abhijit N Shirke, Danielle Basore, Glenn L Butterfoss, Richard Bonneau, Christopher Bystroff

Proteins· January 2016

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InteractiveROSETTA: a graphical user interface for the PyRosetta protein modeling suite.
Christian D Schenkelberg, Christopher Bystroff

Bioinformatics· December 2015

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Toward Computationally Designed Self-Reporting Biosensors Using Leave-One-Out Green Fluorescent Protein.
Yao-Ming Huang, Shounak Banerjee, Donna E Crone, Christian D Schenkelberg, Derek J Pitman, Christopher Bystroff

Biochemistry· October 2015

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Exploring the folding pathway of green fluorescent protein through disulfide engineering.
Derek J Pitman, Shounak Banerjee, Stephen J Macari, Christopher A Castaldi, Donna E Crone, Christopher Bystroff

Protein Sci· March 2015

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Expanded explorations into the optimization of an energy function for protein design.
Yao-Ming Huang, Christopher Bystroff

IEEE/ACM Trans Comput Biol Bioinform· August 2014

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Green-lighting green fluorescent protein: faster and more efficient folding by eliminating a cis-trans peptide isomerization event.
David J Rosenman, Yao-ming Huang, Ke Xia, Keith Fraser, Victoria E Jones, Christopher Bystroff

Protein Sci· April 2014

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Improving computational efficiency and tractability of protein design using a piecemeal approach. A strategy for parallel and distributed protein design.
Derek J Pitman, Christian D Schenkelberg, Yao-Ming Huang, Frank D Teets, Daniel DiTursi, Christopher Bystroff

Bioinformatics· April 2014

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The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
Yan Xia, Nina DiPrimio, Theodore R Keppel, Binh Vo, Keith Fraser, Christopher Bystroff

J Am Chem Soc· December 2013

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Directed evolution of the quorum-sensing regulator EsaR for increased signal sensitivity.
Jasmine Shong, Yao-Ming Huang, Christopher Bystroff, Cynthia H Collins

ACS Chem Biol· April 2013

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Geofold: topology-based protein unfolding pathways capture the effects of engineered disulfides on kinetic stability.
Vibin Ramakrishnan, Sai Praveen Srinivasan, Saeed M Salem, Suzanne J Matthews, Wilfredo Colón, Christopher Bystroff

Proteins· March 2012

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Quantitative in vivo solubility and reconstitution of truncated circular permutants of green fluorescent protein.
Yao-Ming Huang, Sasmita Nayak, Christopher Bystroff

Protein Sci· November 2011

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Comparative void-volume analysis of psychrophilic and mesophilic enzymes: Structural bioinformatics of psychrophilic enzymes reveals sources of core flexibility.
Diana I Paredes, Kyle Watters, Derek J Pitman, Christopher Bystroff, Jonathan S Dordick

BMC Struct Biol· October 2011

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