Publications by authors named "Crystal Hepp"

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Accounting for spatial variation in climatic factors predicts spatial variations in mosquito abundance in the desert southwest.
Kayode Oshinubi, Crystal M Hepp, Ye Chen, Eck Doerry, Nicole Busser

Res Sq· October 2025

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A Systematic Review of Spatial Epidemiological Modeling Approaches Applied During the COVID-19 Pandemic.
Kayode Oshinubi, Ye Chen, Eck Doerry, Esma S Gel, Crystal Hepp

medRxiv· September 2025

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Genomic Epidemiology for Estimating Pathogen Burden in a Population.
W Tanner Porter, David M Engelthaler, Crystal M Hepp

Emerg Infect Dis· May 2025

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Upcycling human excrement: the gut microbiome to soil microbiome axis.
Jeff Meilander, Chloe Herman, Andrew Manley, Georgia Augustine, Dawn Birdsell, Crystal Hepp

ISME Commun· January 2025

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Large Clusters of Invasive emm49 Group A Streptococcus Identified Within Arizona Health Care Facilities Through Statewide Genomic Surveillance System, 2019-2021.
Hayley D Yaglom, Rachana Bhattarai, Darrin Lemmer, Laura Rust, Chase Ridenour, Crystal M Hepp

J Infect Dis· September 2024

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infection disparities among Hispanics and non-Hispanics in Yuma, Arizona.
Talima Pearson, Sarah Kramer, David Panisello Yagüe, Emmanuel Nangkuu, Sarah Medina-Rodriguez, Crystal Hepp

Antimicrob Steward Healthc Epidemiol· September 2024

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A framework for integrating wastewater-based epidemiology and public health.
Hanna Brosky, Sarah M Prasek, Gabriel K Innes, Ian L Pepper, Jasmine Miranda, Crystal M Hepp

Front Public Health· August 2024

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Correlates of Co-Infection with Coccidiosis and Avian Malaria in House Finches (Haemorhous mexicanus).
Victor Aguiar de Souza Penha, Lilian Tonelli Manica, Zachary A Barrand, Crystal M Hepp, Kevin J McGraw

J Wildl Dis· July 2024

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An inaugural forum on epidemiological modeling for public health stakeholders in Arizona.
Joseph R Mihaljevic, Carmenlita Chief, Mehreen Malik, Kayode Oshinubi, Eck Doerry, Crystal Hepp

Front Public Health· June 2024

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Pan-Enterovirus Characterization Reveals Cryptic Circulation of Clinically Relevant Subtypes in Arizona Wastewater.
Daryn E Erickson, Kyle M Simmons, Zachary A Barrand, Chase L Ridenour, Paige B Hawkinson, Crystal M Hepp

medRxiv· March 2024

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Lyssa excreta: Defining parameters for fecal samples as a rabies virus surveillance method.
Faith M Walker, Jordyn R Upton, Daryn Erickson, Zachary A Barrand, Breezy Brock, Crystal M Hepp

PLoS One· January 2024

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Knockdown resistance mutations are common and widely distributed in Xenopsylla cheopis fleas that transmit plague in Madagascar.
Shelby M Hutton, Adelaide Miarinjara, Nathan E Stone, Fara N Raharimalala, Annick O Raveloson, Crystal Hepp

PLoS Negl Trop Dis· August 2023

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Biting midges (Diptera: Ceratopogonidae) as putative vectors of zoonotic (Nematoda: Onchocercidae) in northern Arizona and New Mexico, southwestern United States.
Chandler C Roe, Olivia Holiday, Kelly Upshaw-Bia, Gaven Benally, Charles H D Williamson, Crystal M Hepp

Front Vet Sci· May 2023

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A Quantitative Assessment of Staphylococcus aureus Community Carriage in Yuma, Arizona.
Benjamin Russakoff, Colin Wood, Monica R Lininger, Steven D Barger, Robert T Trotter, Crystal Hepp

J Infect Dis· April 2023

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Application of Phylodynamic Tools to Inform the Public Health Response to COVID-19: Qualitative Analysis of Expert Opinions.
Shannan N Rich, Veronica Richards, Carla Mavian, Brittany Rife Magalis, Nathan Grubaugh, Crystal Hepp

JMIR Form Res· April 2023

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Unique Genomic Epidemiology of COVID-19 in the White Mountain Apache Tribe, April to August 2020, Arizona.
Jolene R Bowers, Hayley D Yaglom, Crystal M Hepp, Ashlyn Pfeiffer, Daniel Jasso-Selles

mSphere· April 2023

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One health genomic surveillance and response to a university-based outbreak of the SARS-CoV-2 Delta AY.25 lineage, Arizona, 2021.
Hayley D Yaglom, Matthew Maurer, Brooke Collins, Jacob Hojnacki, Juan Monroy-Nieto, Crystal M Hepp

PLoS One· November 2022

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LupiQuant: A real-time PCR based assay for determining host-to-parasite DNA ratios of Onchocerca lupi and host Canis lupus from onchocercosis samples.
Chandler C Roe, Jennifer Urbanz, Candace Auten, Guilherme G Verocai, Kelly Upshaw-Bia, Crystal Hepp

PLoS One· November 2022

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SPARSEMODr: Rapidly simulate spatially explicit and stochastic models of COVID-19 and other infectious diseases.
Joseph R Mihaljevic, Seth Borkovec, Saikanth Ratnavale, Toby D Hocking, Kelsey E Banister, Crystal Hepp

Biol Methods Protoc· September 2022

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A sliding window approach to optimize the time-varying parameters of a spatially-explicit and stochastic model of COVID-19.
Saikanth Ratnavale, Crystal Hepp, Eck Doerry, Joseph R Mihaljevic

PLOS Glob Public Health· September 2022

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Characterization of neonatal opioid withdrawal syndrome in Arizona from 2010-2017.
Emery R Eaves, Jarrett Barber, Ryann Whealy, Sara A Clancey, Rita Wright, Crystal M Hepp

PLoS One· October 2021

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Genome Sequences of Community Carriage Strains of Staphylococcus aureus from Yuma, Arizona.
Talima Pearson, Crystal Hepp, Robert T Trotter, Mimi Mbegbu, Benjamin Russakoff

Microbiol Resour Announc· September 2021

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Complete mitochondrial genome of (Nematoda, Onchocercidae).
Chandler C Roe, Jennifer Urbanz, Lela Andrews, Guilherme G Verocai, David M Engelthaler, Crystal M Hepp

Mitochondrial DNA B Resour· August 2021

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St. Louis Encephalitis Virus in the Southwestern United States: A Phylogeographic Case for a Multi-Variant Introduction Event.
Chase L Ridenour, Jill Cocking, Samuel Poidmore, Daryn Erickson, Breezy Brock, Crystal M Hepp

Front Genet· June 2021

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Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity.
Evan Bolyen, Matthew R Dillon, Nicholas A Bokulich, Jason T Ladner, Brendan B Larsen, Crystal M Hepp

F1000Res· February 2021

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