Publications by authors named "Dalen Chan"

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Rewiring of RNA methylation by the oncometabolite fumarate in renal cell carcinoma.
Christina M Fitzsimmons, Mariana D Mandler, Judith C Lunger, Dalen Chan, Siddhardha S Maligireddy, King Chan

NAR Cancer· March 2024

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Diverse functional elements in RNA predicted transcriptome-wide by orthogonal RNA structure probing.
Dalen Chan, Chao Feng, Whitney E England, Dana Wyman, Ryan A Flynn

Nucleic Acids Res· November 2021

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Ten simple rules for acing virtual interviews.
Dalen Chan, Christina M Fitzsimmons, Mariana D Mandler, Pedro J Batista

PLoS Comput Biol· June 2021

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RNA post-transcriptional modification speaks to chromatin.
Dalen Chan, Pedro J Batista

Nat Genet· September 2020

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Functional Conservation of LncRNA JPX Despite Sequence and Structural Divergence.
Heather Karner, Chiu-Ho Webb, Sarah Carmona, Yu Liu, Benjamin Lin, Dalen Chan

J Mol Biol· January 2020

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Assaying RNA structure with LASER-Seq.
Boris Zinshteyn, Dalen Chan, Whitney England, Chao Feng, Rachel Green

Nucleic Acids Res· January 2019

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Assaying RNA Structure Inside Living Cells with SHAPE.
Chao Feng, Dalen Chan, Robert C Spitale

Methods Mol Biol· April 2018

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Light-activated chemical probing of nucleobase solvent accessibility inside cells.
Chao Feng, Dalen Chan, Jojo Joseph, Mikko Muuronen, William H Coldren

Nat Chem Biol· March 2018

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Facile synthesis and evaluation of a dual-functioning furoyl probe for in-cell SHAPE.
Dalen Chan, Samantha Beasley, Yuran Zhen, Robert C Spitale

Bioorg Med Chem Lett· February 2018

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Light-activated chemical probing of nucleobase solvent accessibility inside cells.
Chao Feng, Dalen Chan, Jojo Joseph, Mikko Muuronen, William H Coldren

Nat Chem Biol· February 2018

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Defining Functional Structured RNA inside Living Cells.
Dalen Chan, Robert C Spitale

Biochemistry· November 2017

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Measuring RNA structure transcriptome-wide with icSHAPE.
Dalen Chan, Chao Feng, Robert C Spitale

Methods· May 2017

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Comparative Analysis Reveals Furoyl in Vivo Selective Hydroxyl Acylation Analyzed by Primer Extension Reagents Form Stable Ribosyl Ester Adducts.
Dalen Chan, Chao Feng, Yuran Zhen, Ryan A Flynn, Robert C Spitale

Biochemistry· April 2017

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RNA structure: merging chemistry and genomics for a holistic perspective.
Miles Kubota, Dalen Chan, Robert C Spitale

Bioessays· October 2015

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Structural analysis of a class III preQ1 riboswitch reveals an aptamer distant from a ribosome-binding site regulated by fast dynamics.
Joseph A Liberman, Krishna C Suddala, Asaminew Aytenfisu, Dalen Chan, Ivan A Belashov

Proc Natl Acad Sci U S A· July 2015

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A screening protocol for identification of functional mutants of RNA editing adenosine deaminases.
Tristan Eifler, Dalen Chan, Peter A Beal

Curr Protoc Chem Biol· December 2012

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