Publications by authors named "Damian Keefe"

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Ensembl regulation resources.
Daniel R Zerbino, Nathan Johnson, Thomas Juetteman, Dan Sheppard, Steven P Wilder, Damian Keefe

Database (Oxford)· October 2016

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Ensembl 2012.
Paul Flicek, M Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Damian Keefe

Nucleic Acids Res· January 2012

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Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.
Lingyun Song, Zhancheng Zhang, Linda L Grasfeder, Alan P Boyle, Paul G Giresi, Damian Keefe

Genome Res· October 2011

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High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells.
Alan P Boyle, Lingyun Song, Bum-Kyu Lee, Darin London, Damian Keefe

Genome Res· March 2011

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Ensembl 2011.
Paul Flicek, M Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Damian Keefe

Nucleic Acids Res· January 2011

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Heritable individual-specific and allele-specific chromatin signatures in humans.
Ryan McDaniell, Bum-Kyu Lee, Lingyun Song, Zheng Liu, Alan P Boyle, Damian Keefe

Science· April 2010

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Ensembl's 10th year.
Paul Flicek, Bronwen L Aken, Benoit Ballester, Kathryn Beal, Eugene Bragin, Damian Keefe

Nucleic Acids Res· January 2010

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A gene regulatory network directed by zebrafish No tail accounts for its roles in mesoderm formation.
Rosalind H Morley, Kim Lachani, Damian Keefe, Michael J Gilchrist, Paul Flicek

Proc Natl Acad Sci U S A· March 2009

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Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome.
Elliott H Margulies, Gregory M Cooper, George Asimenos, Daryl J Thomas, Colin N Dewey, Damian Keefe

Genome Res· June 2007

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Nature· June 2007

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An overview of Ensembl.
Ewan Birney, T Daniel Andrews, Paul Bevan, Mario Caccamo, Yuan Chen, Damian Keefe

Genome Res· May 2004

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EnsMart: a generic system for fast and flexible access to biological data.
Arek Kasprzyk, Damian Keefe, Damian Smedley, Darin London, William Spooner

Genome Res· January 2004

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