Publications by authors named "Daniela Kalafatovic"

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Understanding Biases in Liquid-Liquid Phase Separation: Investigating Amino Acid Enrichments in Phase-Separating Proteins toward Peptide Design.
Joana Calvário, Diogo Antunes, Rita Cipriano, Daniela Kalafatovic, Goran Mauša

Biomacromolecules· November 2025

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A multi-library approach to parallelised sequence space exploration: Streamlining library design and search space coverage.
Marko Njirjak, Erik Otović, Daniela Kalafatovic, Goran Mauša

Comput Biol Med· November 2025

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In Vitro and In Vivo Characterization of Novel Cathelicidin-Based Peptides with Antimicrobial Activity Against .
Javier Moreno-Morales, Núria Martín-Vilardell, Salvador Guardiola, Xavier Vila-Farrés, Tania Cebrero

Antibiotics (Basel)· August 2025

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Using Machine Learning to Fast-Track Peptide Nanomaterial Discovery.
Ena Dražić, Darijan Jelušić, Patrizia Janković Bevandić, Goran Mauša, Daniela Kalafatovic

ACS Nano· June 2025

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Early evolution of mumps-HCV chimeric viruses in Vero cells induces loss of HCV gene expression and promotes accumulation of substitutions uncharacteristic of mumps strains.
Dorotea Pali, Dubravko Forčić, Maja Jagušić, Tanja Košutić Gulija, Mirna Jurković, Daniela Kalafatovic

Virology· February 2025

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Amyloids, amorphous aggregates and assemblies of peptides - Assessing aggregation.
Maja Juković, Ivana Ratkaj, Daniela Kalafatovic, Nicholas J Bradshaw

Biophys Chem· May 2024

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Determining the esterase activity of peptides and peptide assemblies.
Patrizia Janković, Daniela Kalafatovic

Methods Enzymol· May 2024

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Manually curated dataset of catalytic peptides for ester hydrolysis.
Patrizia Janković, Erik Otović, Goran Mauša, Daniela Kalafatovic

Data Brief· June 2023

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Antiviral Peptide-Based Conjugates: State of the Art and Future Perspectives.
Toni Todorovski, Daniela Kalafatovic, David Andreu

Pharmaceutics· January 2023

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Esterase Sequence Composition Patterns for the Identification of Catalytic Triad Microenvironment Motifs.
Marko Babić, Patrizia Janković, Silvia Marchesan, Goran Mauša, Daniela Kalafatovic

J Chem Inf Model· December 2022

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Mint ( spp.) Honey: Analysis of the Phenolic Profile and Antioxidant Activity.
Tomislav Pavlešić, Sanja Poljak, Dijana Mišetić Ostojić, Ivana Lučin, Christian A Reynolds, Daniela Kalafatovic

Food Technol Biotechnol· December 2022

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Sequential Properties Representation Scheme for Recurrent Neural Network-Based Prediction of Therapeutic Peptides.
Erik Otović, Marko Njirjak, Daniela Kalafatovic, Goran Mauša

J Chem Inf Model· June 2022

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Discovery of phosphotyrosine-binding oligopeptides with supramolecular target selectivity.
Ana S Pina, Leonor Morgado, Krystyna L Duncan, Sara Carvalho, Henrique F Carvalho, Daniela Kalafatovic

Chem Sci· December 2021

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Exploiting Peptide Self-Assembly for the Development of Minimalistic Viral Mimetics.
Patrizia Janković, Iva Šantek, Ana Sofia Pina, Daniela Kalafatovic

Front Chem· July 2021

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Bottom-Up Design Approach for OBOC Peptide Libraries.
Daniela Kalafatovic, Goran Mauša, Dina Rešetar Maslov, Ernest Giralt

Molecules· July 2020

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Algorithm-supported, mass and sequence diversity-oriented random peptide library design.
Daniela Kalafatovic, Goran Mauša, Toni Todorovski, Ernest Giralt

J Cheminform· March 2019

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Customizing Morphology, Size, and Response Kinetics of Matrix Metalloproteinase-Responsive Nanostructures by Systematic Peptide Design.
Jiye Son, Daniela Kalafatovic, Mohit Kumar, Barney Yoo, Mike A Cornejo

ACS Nano· February 2019

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Publisher Correction: MSK1 regulates luminal cell differentiation and metastatic dormancy in ER breast cancer.
Sylwia Gawrzak, Lorenzo Rinaldi, Sara Gregorio, Enrique J Arenas, Fernando Salvador, Daniela Kalafatovic

Nat Cell Biol· August 2018

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MSK1 regulates luminal cell differentiation and metastatic dormancy in ER breast cancer.
Sylwia Gawrzak, Lorenzo Rinaldi, Sara Gregorio, Enrique J Arenas, Fernando Salvador, Daniela Kalafatovic

Nat Cell Biol· February 2018

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Cell-Penetrating Peptides: Design Strategies beyond Primary Structure and Amphipathicity.
Daniela Kalafatovic, Ernest Giralt

Molecules· November 2017

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MMP-9 triggered self-assembly of doxorubicin nanofiber depots halts tumor growth.
Daniela Kalafatovic, Max Nobis, Jiye Son, Kurt I Anderson, Rein V Ulijn

Biomaterials· August 2016

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Alignment of nanostructured tripeptide gels by directional ultrasonication.
Charalampos G Pappas, Pim W J M Frederix, Tapiwa Mutasa, Scott Fleming, Yousef M Abul-Haija, Daniela Kalafatovic

Chem Commun (Camb)· May 2015

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MMP-9 triggered micelle-to-fibre transitions for slow release of doxorubicin.
Daniela Kalafatovic, Max Nobis, Nadeem Javid, Pim W J M Frederix, Kurt I Anderson

Biomater Sci· February 2015

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Exploring the sequence space for (tri-)peptide self-assembly to design and discover new hydrogels.
Pim W J M Frederix, Gary G Scott, Yousef M Abul-Haija, Daniela Kalafatovic, Charalampos G Pappas

Nat Chem· January 2015

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