Publications by authors named "David Agard"

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A novel lncRNA FAM151B-DT regulates degradation of aggregation prone proteins.
Arun Renganathan, Miguel A Minaya, Matthew Broder, Isabel Alfradique-Dunham, Rebecca L Miller, David A Agard

Mol Psychiatry· December 2025

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Cathepsin C-Catalyzed Ligation Generates Intralysosomal Amyloid Fibrils from Dipeptide Esters.
Ruben D Elias, Robert T O'Neill, Idil I Demiralp, Seth Allen, Daniel Serwas, David A Agard

bioRxiv· December 2025

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A realistic phantom dataset for benchmarking cryo-ET data annotation.
Ariana Peck, Yue Yu, Jonathan Schwartz, Anchi Cheng, Utz Heinrich Ermel, David A Agard

Nat Methods· September 2025

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The structure of basal body inner junctions from Tetrahymena revealed by electron cryo-tomography.
Sam Li, Jose-Jesus Fernandez, Marisa D Ruehle, Rachel A Howard-Till, Amy Fabritius, David A Agard

EMBO J· April 2025

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Jumbo phage killer immune system targets early infection of nucleus-forming phages.
Li Yuping, Linlin Guan, Isabelle Becher, Kira S Makarova, Xueli Cao, David Agard

Cell· April 2025

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Real-space heterogeneous reconstruction, refinement, and disentanglement of CryoEM conformational states with HetSIREN.
David Herreros, Carlos Perez Mata, Chari Noddings, Deli Irene, James Krieger, David A Agard

Nat Commun· April 2025

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Deconvolution to restore cryo-EM maps with anisotropic resolution.
Junrui Li, Yifei Chen, Shawn Zheng, Angus McDonald, John W Sedat, David A Agard

bioRxiv· March 2025

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Deconvolution to restore cryo-EM maps with anisotropic resolution.
Yifan Cheng, Junrui Li, Yifei Chen, Shawn Zheng, Angus McDonald, David Agard

Res Sq· March 2025

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A novel lncRNA FAM151B-DT regulates autophagy and degradation of aggregation prone proteins.
Arun Renganathan, Miguel A Minaya, Matthew Broder, Isabel Alfradique-Dunham, Michelle Moritz, David A Agard

medRxiv· January 2025

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The Structure of Cilium Inner Junctions Revealed by Electron Cryo-tomography.
Sam Li, Jose-Jesus Fernandez, Marisa D Ruehle, Rachel A Howard-Till, Amy Fabritius, David A Agard

bioRxiv· September 2024

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Poc1 bridges basal body inner junctions to promote triplet microtubule integrity and connections.
Marisa D Ruehle, Sam Li, David A Agard, Chad G Pearson

J Cell Biol· August 2024

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Characterization of a lipid-based jumbo phage compartment as a hub for early phage infection.
Deepto Mozumdar, Andrea Fossati, Erica Stevenson, Jingwen Guan, Eliza Nieweglowska, David Agard

Cell Host Microbe· July 2024

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Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Un Seng Chio, Eugene Palovcak, Anton A A Smith, Henriette Autzen, Elise N Muñoz, David A Agard

Nat Commun· March 2024

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Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the glucocorticoid receptor.
Chari M Noddings, Jill L Johnson, David A Agard

Nat Struct Mol Biol· December 2023

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De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.
Zhen Chen, Momoko Shiozaki, Kelsey M Haas, Will M Skinner, Shumei Zhao, David A Agard

Cell· November 2023

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The next decade in structural biology.
Martin A Walsh, Brent L Nannenga, Tamir Gonen, Patrick M Sexton, Denise Wootten, David Agard

Structure· November 2023

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Poc1 is a basal body inner junction protein that promotes triplet microtubule integrity and interconnections.
Marisa D Ruehle, Sam Li, David A Agard, Chad G Pearson

bioRxiv· November 2023

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Next-generation proteomics for quantitative Jumbophage-bacteria interaction mapping.
Andrea Fossati, Deepto Mozumdar, Claire Kokontis, Melissa Mèndez-Moran, Eliza Nieweglowska, David A Agard

Nat Commun· August 2023

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Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Un Seng Chio, Eugene Palovcak, Anton A A Autzen, Henriette E Autzen, Elise N Muñoz, David A Agard

bioRxiv· June 2023

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Intra-operative Urodynamics: Is the Test an Accurate Representation of the Lower Urinary Tract in Children?
Hannah A Bachtel, Eric Massanyi, Rhys Irvine, David B Agard, Daniel McMahon

Urology· May 2023

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Hsp90 provides a platform for kinase dephosphorylation by PP5.
Maru Jaime-Garza, Carlos A Nowotny, Daniel Coutandin, Feng Wang, Mariano Tabios, David A Agard

Nat Commun· April 2023

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Next-generation interaction proteomics for quantitative Jumbophage-bacteria interaction mapping.
Andrea Fossati, Deepto Mozumdar, Claire Kokontis, Melissa Mèndez-Moran, Eliza Nieweglowska, David A Agard

bioRxiv· February 2023

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The ϕPA3 phage nucleus is enclosed by a self-assembling 2D crystalline lattice.
Eliza S Nieweglowska, Axel F Brilot, Melissa Méndez-Moran, Claire Kokontis, Minkyung Baek, David A Agard

Nat Commun· February 2023

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Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the Glucocorticoid Receptor.
Chari M Noddings, Jill L Johnson, David A Agard

bioRxiv· January 2023

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Solution of the protein structure prediction problem at last: crucial innovations and next frontiers.
David A Agard, Gregory R Bowman, William DeGrado, Nikolay V Dokholyan, Huan-Xiang Zhou

Fac Rev· December 2022

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