Publications by authors named "David B Archer"

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Sorbic acid resistance and metabolism of Brettanomyces bruxellensis in the spoilage of low sugar soft drinks.
Harry J Harvey, Kamil J Szepe, Alex C Hendry, David B Archer, Simon V Avery

Int J Food Microbiol· December 2025

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Evaluating the potential of natural product combinations with sorbic acid for improving preservative action against food-spoilage yeasts.
Harry J Harvey, Alex C Hendry, David B Archer, Simon V Avery

Fungal Biol· November 2023

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Adaptation to sorbic acid in low sugar promotes resistance of yeast to the preservative.
Harry J Harvey, Alex C Hendry, Marcella Chirico, David B Archer, Simon V Avery

Heliyon· November 2023

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The Preservative Sorbic Acid Targets Respiration, Explaining the Resistance of Fermentative Spoilage Yeast Species.
Malcolm Stratford, Cindy Vallières, Ivey A Geoghegan, David B Archer, Simon V Avery

mSphere· May 2020

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Succession of physiological stages hallmarks the transcriptomic response of the fungus to lignocellulose.
Jolanda M van Munster, Paul Daly, Martin J Blythe, Roger Ibbett, Matt Kokolski, David B Archer

Biotechnol Biofuels· April 2020

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Weak Acid Resistance A (WarA), a Novel Transcription Factor Required for Regulation of Weak-Acid Resistance and Spore-Spore Heterogeneity in Aspergillus niger.
Ivey A Geoghegan, Malcolm Stratford, Mike Bromley, David B Archer, Simon V Avery

mSphere· January 2020

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Method for RNA extraction and transcriptomic analysis of single fungal spores.
Ivey A Geoghegan, Richard D Emes, David B Archer, Simon V Avery

MethodsX· December 2019

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Extreme Osmotolerance and Halotolerance in Food-Relevant Yeasts and the Role of Glycerol-Dependent Cell Individuality.
Malcolm Stratford, Hazel Steels, Michaela Novodvorska, David B Archer, Simon V Avery

Front Microbiol· January 2019

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Process development for the continuous production of heterologous proteins by the industrial yeast, Komagataella phaffii.
Ayca Cankorur-Cetinkaya, Nathalie Narraidoo, Ceyda Kasavi, Nigel K H Slater, David B Archer

Biotechnol Bioeng· December 2018

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Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme expression.
Paul Daly, Jolanda M van Munster, Matthew Kokolski, Fei Sang, Martin J Blythe, David B Archer

Fungal Genet Biol· May 2017

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Expression of CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments.
Paul Daly, Jolanda M van Munster, Martin J Blythe, Roger Ibbett, Matt Kokolski, David B Archer

Biotechnol Biofuels· February 2017

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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
Ronald P de Vries, Robert Riley, Ad Wiebenga, Guillermo Aguilar-Osorio, Sotiris Amillis, David B Archer

Genome Biol· February 2017

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Application of carbohydrate arrays coupled with mass spectrometry to detect activity of plant-polysaccharide degradative enzymes from the fungus Aspergillus niger.
Jolanda M van Munster, Baptiste Thomas, Michel Riese, Adrienne L Davis, Christopher J Gray, David B Archer

Sci Rep· February 2017

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Metabolic activity in dormant conidia of Aspergillus niger and developmental changes during conidial outgrowth.
Michaela Novodvorska, Malcolm Stratford, Martin J Blythe, Raymond Wilson, Richard G Beniston, David B Archer

Fungal Genet Biol· September 2016

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The roles of the zinc finger transcription factors XlnR, ClrA and ClrB in the breakdown of lignocellulose by Aspergillus niger.
Roxane Raulo, Matthew Kokolski, David B Archer

AMB Express· March 2016

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Biochemical and molecular characterization of an atypical manganese peroxidase of the litter-decomposing fungus Agrocybe praecox.
Kristiina Hildén, Miia R Mäkelä, Kari T Steffen, Martin Hofrichter, Annele Hatakka, David B Archer

Fungal Genet Biol· November 2014

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The role of carbon starvation in the induction of enzymes that degrade plant-derived carbohydrates in Aspergillus niger.
Jolanda M van Munster, Paul Daly, Stéphane Delmas, Steven T Pullan, Martin J Blythe, David B Archer

Fungal Genet Biol· November 2014

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RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in .
Steven T Pullan, Paul Daly, Stéphane Delmas, Roger Ibbett, Matthew Kokolski, David B Archer

Fungal Biol Biotechnol· November 2014

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RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in .
Steven T Pullan, Paul Daly, Stéphane Delmas, Roger Ibbett, Matthew Kokolski, David B Archer

Fungal Biol Biotechnol· November 2014

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Germination of Aspergillus niger conidia is triggered by nitrogen compounds related to L-amino acids.
Kimran Hayer, Malcolm Stratford, David B Archer

Appl Environ Microbiol· October 2014

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Population heterogeneity and dynamics in starter culture and lag phase adaptation of the spoilage yeast Zygosaccharomyces bailii to weak acid preservatives.
Malcolm Stratford, Hazel Steels, Gerhard Nebe-von-Caron, Simon V Avery, Michaela Novodvorska, David B Archer

Int J Food Microbiol· July 2014

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Development of an unmarked gene deletion system for the filamentous fungi Aspergillus niger and Talaromyces versatilis.
Stéphane Delmas, Agustina Llanos, Jean-Luc Parrou, Matthew Kokolski, Steven T Pullan, David B Archer

Appl Environ Microbiol· June 2014

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A solid state fungal fermentation-based strategy for the hydrolysis of wheat straw.
Nattha Pensupa, Meng Jin, Matt Kokolski, David B Archer, Chenyu Du

Bioresour Technol· December 2013

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Investigating the physiological response of Pichia (Komagataella) pastoris GS115 to the heterologous expression of misfolded proteins using chemostat cultures.
Andrew R Hesketh, Juan I Castrillo, Trevor Sawyer, David B Archer, Stephen G Oliver

Appl Microbiol Biotechnol· November 2013

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Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger.
Laure Ries, Steven T Pullan, Stéphane Delmas, Sunir Malla, Martin J Blythe, David B Archer

BMC Genomics· August 2013

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