Publications by authors named "David M Goodstein"

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Genome-resolved biogeography of Phaeocystales, cosmopolitan bloom-forming algae.
Zoltán Füssy, Robert H Lampe, Kevin R Arrigo, Kerrie Barry, Margaret M Brisbin, David M Goodstein

Nat Commun· September 2025

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A view of the pan-genome of domesticated Cowpea (Vigna unguiculata [L.] Walp.).
Qihua Liang, María Muñoz-Amatriaín, Shengqiang Shu, Sassoum Lo, Xinyi Wu, David M Goodstein

Plant Genome· March 2024

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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum.
Li Lei, Sean P Gordon, Lifeng Liu, Nir Sade, John T Lovell, David M Goodstein

G3 (Bethesda)· December 2023

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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
Virginia T Scarlett, John T Lovell, Mingqin Shao, Jeremy Phillips, Shengqiang Shu, David M Goodstein

Genetics· February 2023

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The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory.
Rory J Craig, Sean D Gallaher, Shengqiang Shu, Patrice A Salomé, Jerry W Jenkins, David M Goodstein

Plant Cell· February 2023

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GENESPACE tracks regions of interest and gene copy number variation across multiple genomes.
John T Lovell, Avinash Sreedasyam, M Eric Schranz, Melissa Wilson, Joseph W Carlson, David M Goodstein

Elife· September 2022

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Genome sequence and evolution of Betula platyphylla.
Su Chen, Yucheng Wang, Lili Yu, Tao Zheng, Sui Wang, David M Goodstein

Hortic Res· February 2021

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Construction and comparison of three reference-quality genome assemblies for soybean.
Babu Valliyodan, Steven B Cannon, Philipp E Bayer, Shengqiang Shu, Anne V Brown, David M Goodstein

Plant J· December 2019

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The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism.
Xiaohan Yang, Rongbin Hu, Hengfu Yin, Jerry Jenkins, Shengqiang Shu, David M Goodstein

Nat Commun· December 2017

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JBrowse: a dynamic web platform for genome visualization and analysis.
Robert Buels, Eric Yao, Colin M Diesh, Richard D Hayes, Monica Munoz-Torres, David M Goodstein

Genome Biol· April 2016

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A reference genome for common bean and genome-wide analysis of dual domestications.
Jeremy Schmutz, Phillip E McClean, Sujan Mamidi, G Albert Wu, Steven B Cannon, David M Goodstein

Nat Genet· July 2014

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The genome of Eucalyptus grandis.
Alexander A Myburg, Dario Grattapaglia, Gerald A Tuskan, Uffe Hellsten, Richard D Hayes, David M Goodstein

Nature· June 2014

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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution.

Nat Genet· May 2013

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Phytozome: a comparative platform for green plant genomics.
David M Goodstein, Shengqiang Shu, Russell Howson, Rochak Neupane, Richard D Hayes

Nucleic Acids Res· January 2012

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The Amphimedon queenslandica genome and the evolution of animal complexity.
Mansi Srivastava, Oleg Simakov, Jarrod Chapman, Bryony Fahey, Marie E A Gauthier, David M Goodstein

Nature· August 2010

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The dynamic genome of Hydra.
Jarrod A Chapman, Ewen F Kirkness, Oleg Simakov, Steven E Hampson, Therese Mitros, David M Goodstein

Nature· March 2010

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The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.
Paramvir Dehal, Yutaka Satou, Robert K Campbell, Jarrod Chapman, Bernard Degnan, David M Goodstein

Science· December 2002

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