Publications by authors named "Doyle Ward"

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The urinary microbiome distinguishes symptomatic urinary tract infection from asymptomatic older adult patients presenting to the emergency department.
Evan S Bradley, Celina Stansky, Abigail L Zeamer, Ziyuan Huang, Lindsey Cincotta, Doyle V Ward

Virulence· December 2025

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Basic Science and Pathogenesis.
Ziyuan Huang, Vishaldeep Kaur Sekhon, Ouyang Guo, Mark Newman, Roozbeh Sadeghian, Doyle Ward

Alzheimers Dement· December 2025

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ADAM-1: An AI Reasoning and Bioinformatics Model for Alzheimer's Disease Detection and Microbiome-Clinical Data Integration.
Ziyuan Huang, Vishaldeep Kaur Sekhon, Roozbeh Sadeghian, Maria L Vaida, Cynthia Jo, Doyle V Ward

IEEE Access· August 2025

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Microbiome functional gene pathways predict cognitive performance in older adults with Alzheimer's disease.
Abigail L Zeamer, Yushuan Lai, Victoria Sanborn, Ethan Loew, Matthew Tracy, Doyle V Ward

bioRxiv· March 2025

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Succinate-producing microbiota drives tuft cell hyperplasia to protect against Clostridioides difficile.
Tasia D Kellogg, Simona Ceglia, Benedikt M Mortzfeld, Tanvi M Tanna, Abigail L Zeamer, Doyle V Ward

J Exp Med· January 2025

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Design, creation, and use of the Test Us Bank (TUB) COVID-19 sample biorepository.
John Broach, Chad Achenbach, Stephanie Behar, Laurel O'Connor, Seanan Tarrant, Doyle V Ward

BMC Infect Dis· November 2024

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The effects of antibiotic exposures on the gut resistome during hematopoietic cell transplantation in children.
Sarah M Heston, Rebecca R Young, Kirsten Jenkins, Paul L Martin, Andre Stokhuyzen, Doyle V Ward

Gut Microbes· April 2024

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Microbiota encoded fatty-acid metabolism expands tuft cells to protect tissues homeostasis during infection in the large intestine.
Tasia D Kellogg, Simona Ceglia, Benedikt M Mortzfeld, Abigail L Zeamer, Sage E Foley, Doyle V Ward

bioRxiv· January 2024

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The lncRNA HOXA11os regulates mitochondrial function in myeloid cells to maintain intestinal homeostasis.
Liraz Shmuel-Galia, Fiachra Humphries, Tim Vierbuchen, Zhaozhao Jiang, Nolan Santos, Doyle Ward

Cell Metab· August 2023

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The intestinal microbiota predicts COVID-19 severity and fatality regardless of hospital feeding method.
Vanni Bucci, Doyle V Ward, Shakti Bhattarai, Mayra Rojas-Correa, Ayan Purkayastha

mSystems· August 2023

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The microbiota of pregnant women with SARS-CoV-2 and their infants.
Heidi K Leftwich, Daniela Vargas-Robles, Mayra Rojas-Correa, Yan Rou Yap, Shakti Bhattarai, Doyle V Ward

Microbiome· June 2023

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Evolved bacterial resistance to the chemotherapy gemcitabine modulates its efficacy in co-cultured cancer cells.
Serkan Sayin, Brittany Rosener, Carmen G Li, Bao Ho, Olga Ponomarova, Doyle V Ward

Elife· February 2023

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Differential effects of -enriched fecal microbiota transplant on energy balance in female mice on high-fat diet.
Kalpana D Acharya, Randall H Friedline, Doyle V Ward, Madeline E Graham, Lauren Tauer

Front Endocrinol (Lausanne)· November 2022

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The epithelial-specific ER stress sensor ERN2/IRE1β enables host-microbiota crosstalk to affect colon goblet cell development.
Michael J Grey, Heidi De Luca, Doyle V Ward, Irini Am Kreulen, Katlynn Bugda Gwilt

J Clin Invest· September 2022

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Oropharyngeal microbiome profiled at admission is predictive of the need for respiratory support among COVID-19 patients.
Evan S Bradley, Abigail L Zeamer, Vanni Bucci, Lindsey Cincotta, Marie-Claire Salive, Doyle V Ward

Front Microbiol· September 2022

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Epithelial HNF4A shapes the intraepithelial lymphocyte compartment via direct regulation of immune signaling molecules.
Xuqiu Lei, Natalia Ketelut-Carneiro, Liraz Shmuel-Galia, Weili Xu, Ruth Wilson, Doyle Ward

J Exp Med· August 2022

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The Urinary Microbiome of Older Adults Residing in a Nursing Home Varies With Duration of Residence and Shows Increases in Potential Pathogens.
Evan S Bradley, Brent Schell, Doyle V Ward, Vanni Bucci, Abigail Zeamer

J Gerontol A Biol Sci Med Sci· July 2022

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COVID-19 Variant Surveillance and Social Determinants in Central Massachusetts: Development Study.
Qiming Shi, Carly Herbert, Doyle V Ward, Karl Simin, Beth A McCormick

JMIR Form Res· June 2022

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Epidemiological and clinical features of Panton-Valentine Leukocidin positive Staphylococcus aureus bacteremia: A case-control study.
Ming Da Qu, Humera Kausar, Stephen Smith, Peter G Lazar, Aimee R Kroll-Desrosiers, Doyle V Ward

PLoS One· May 2022

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Dietary manipulation of the gut microbiome in inflammatory bowel disease patients: Pilot study.
Barbara Olendzki, Vanni Bucci, Caitlin Cawley, Rene Maserati, Margaret McManus, Doyle V Ward

Gut Microbes· May 2022

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Oropharyngeal Microbiome Profiled at Admission is Predictive of the Need for Respiratory Support Among COVID-19 Patients.
Evan S Bradley, Abigail L Zeamer, Vanni Bucci, Lindsey Cincotta, Marie-Claire Salive, Doyle V Ward

medRxiv· February 2022

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The Nursing Home Older Adult Gut Microbiome Composition Shows Time-dependent Dysbiosis and Is Influenced by Medication Exposures, Age, Environment, and Frailty.
John P Haran, Abigail Zeamer, Doyle V Ward, Protiva Dutta, Vanni Bucci

J Gerontol A Biol Sci Med Sci· October 2021

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Inflammation-type dysbiosis of the oral microbiome associates with the duration of COVID-19 symptoms and long COVID.
John P Haran, Evan Bradley, Abigail L Zeamer, Lindsey Cincotta, Marie-Claire Salive, Doyle V Ward

JCI Insight· October 2021

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Gut microbiota regulation of P-glycoprotein in the intestinal epithelium in maintenance of homeostasis.
Sage E Foley, Christine Tuohy, Merran Dunford, Michael J Grey, Heidi De Luca, Doyle V Ward

Microbiome· September 2021

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Dysbiosis exacerbates colitis by promoting ubiquitination and accumulation of the innate immune adaptor STING in myeloid cells.
Liraz Shmuel-Galia, Fiachra Humphries, Xuqiu Lei, Simona Ceglia, Ruth Wilson, Doyle Ward

Immunity· June 2021

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