Publications by authors named "Eleftherios Garyfallidis"

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Spatially regularized super-resolved constrained spherical deconvolution (SR-CSD) of diffusion MRI data.
Ekin Taskin, Gabriel Girard, Juan Luis Villarreal Haro, Jonathan Rafael-Patiño, Eleftherios Garyfallidis

Neuroimage· December 2025

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White Matter Tract Vulnerability to Amyloid Pathology on the Alzheimer's Disease Continuum.
Bramsh Qamar Chandio, Talia M Nir, Julio E Villalon-Reina, Sophia I Thomopoulos, Yixue Feng, Eleftherios Garyfallidis

bioRxiv· November 2025

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FORCE: FORward modeling for Complex microstructure Estimation.
Atharva Jaydeep Shah, Rafael Neto Henriques, Alonso Ramirez-Manzanares, Patryk Filipiak, Steven Baete, Eleftherios Garyfallidis

Res Sq· November 2025

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A software ecosystem for brain tractometry processing, analysis, and insight.
John Kruper, Adam Richie-Halford, Joanna Qiao, Asa Gilmore, Kelly Chang, Eleftherios Garyfallidis

PLoS Comput Biol· August 2025

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Amyloid, Tau, and APOE in Alzheimer's Disease: Impact on White Matter Tracts.
Bramsh Qamar Chandio, Julio E Villalon-Reina, Talia M Nir, Sophia I Thomopoulos, Yixue Feng, Eleftherios Garyfallidis

Pac Symp Biocomput· December 2024

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Multi-view fusion of diffusion MRI microstructural models: a preterm birth study.
Rosella Trò, Monica Roascio, Domenico Tortora, Mariasavina Severino, Andrea Rossi, Eleftherios Garyfallidis

Front Neurosci· December 2024

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MICCAI-CDMRI 2023 QuantConn Challenge Findings on Achieving Robust Quantitative Connectivity through Harmonized Preprocessing of Diffusion MRI.
Nancy R Newlin, Kurt Schilling, Serge Koudoro, Bramsh Qamar Chandio, Praitayini Kanakaraj, Eleftherios Garyfallidis

ArXiv· November 2024

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Amyloid, Tau, and APOE in Alzheimer's Disease: Impact on White Matter Tracts.
Bramsh Qamar Chandio, Julio E Villalon-Reina, Talia M Nir, Sophia I Thomopoulos, Yixue Feng, Eleftherios Garyfallidis

bioRxiv· August 2024

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Bundle Analytics based Data Harmonization for Multi-Site Diffusion MRI Tractometry.
Bramsh Qamar Chandio, Julio E Villalon-Reina, Talia M Nir, Sophia I Thomopoulos, Yixue Feng, Eleftherios Garyfallidis

Annu Int Conf IEEE Eng Med Biol Soc· July 2024

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Author Correction: brainlife.io: a decentralized and open-source cloud platform to support neuroscience research.
Soichi Hayashi, Bradley A Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher, Brent McPherson, Eleftherios Garyfallidis

Nat Methods· June 2024

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brainlife.io: a decentralized and open-source cloud platform to support neuroscience research.
Soichi Hayashi, Bradley A Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher, Brent McPherson, Eleftherios Garyfallidis

Nat Methods· May 2024

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DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images.
Praitayini Kanakaraj, Tianyuan Yao, Leon Y Cai, Ho Hin Lee, Nancy R Newlin, Eleftherios Garyfallidis

Neuroinformatics· April 2024

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Multi-scale V-net architecture with deep feature CRF layers for brain extraction.
Jong Sung Park, Shreyas Fadnavis, Eleftherios Garyfallidis

Commun Med (Lond)· February 2024

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DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images.
Praitayini Kanakaraj, Tianyuan Yao, Leon Y Cai, Ho Hin Lee, Nancy R Newlin, Eleftherios Garyfallidis

Res Sq· November 2023

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: A decentralized and open source cloud platform to support neuroscience research.
Soichi Hayashi, Bradley A Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher, Brent McPherson, Eleftherios Garyfallidis

ArXiv· August 2023

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Horizon, closing the gap between cinematic visualization and medical imaging.
Javier Guaje, Serge Koudoro, Eleftherios Garyfallidis

medRxiv· July 2023

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Denoising of diffusion MRI in the cervical spinal cord - effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity.
Kurt G Schilling, Shreyas Fadnavis, Joshua Batson, Mereze Visagie, Anna J E Combes, Eleftherios Garyfallidis

Neuroimage· February 2023

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BundleWarp, streamline-based nonlinear registration of white matter tracts.
Bramsh Qamar Chandio, Emanuele Olivetti, David Romero-Bascones, Jaroslaw Harezlak, Eleftherios Garyfallidis

bioRxiv· January 2023

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Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography.
Etienne St-Onge, Eleftherios Garyfallidis, D Louis Collins

Neuroinformatics· October 2022

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FiberNeat: Unsupervised White Matter Tract Filtering.
Bramsh Qamar Chandio, Tamoghna Chattopadhyay, Conor Owens-Walton, Julio E Villalon Reina, Leila Nabulsi, Eleftherios Garyfallidis

Annu Int Conf IEEE Eng Med Biol Soc· July 2022

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What's new and what's next in diffusion MRI preprocessing.
Chantal M W Tax, Matteo Bastiani, Jelle Veraart, Eleftherios Garyfallidis, M Okan Irfanoglu

Neuroimage· April 2022

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Learning white matter subject-specific segmentation from structural MRI.
Qi Yang, Colin B Hansen, Leon Y Cai, Francois Rheault, Ho Hin Lee, Eleftherios Garyfallidis

Med Phys· April 2022

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Bifurcated Topological Optimization for IVIM.
Shreyas Fadnavis, Stefan Endres, Qiuting Wen, Yu-Chien Wu, Hu Cheng, Eleftherios Garyfallidis

Front Neurosci· December 2021

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Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?
Kurt G Schilling, François Rheault, Laurent Petit, Colin B Hansen, Vishwesh Nath, Eleftherios Garyfallidis

Neuroimage· November 2021

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Evaluating the Reliability of Human Brain White Matter Tractometry.
John Kruper, Jason D Yeatman, Adam Richie-Halford, David Bloom, Mareike Grotheer, Eleftherios Garyfallidis

Apert Neuro· November 2021

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