Publications by authors named "Elizabeth Read"

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Scalable inference and identifiability of kinetic parameters for transcriptional bursting from single cell data.
Junhao Gu, Nandor Laszik, Christopher E Miles, Jun Allard, Timothy L Downing, Elizabeth L Read

Bioinformatics· November 2025

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Methylation pseudotime analysis for label-free profiling of the temporal chromatin landscape with long-read sequencing.
Annie Trinh, Navied Akhtar, Kwadwo Bonsu, Nandor Laszik, Asia Mendelevich, Elizabeth L Read

bioRxiv· March 2025

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Locally correlated kinetics of post-replication DNA methylation reveals processivity and region specificity in DNA methylation maintenance.
Honglei Ren, Robert B Taylor, Timothy L Downing, Elizabeth L Read

J R Soc Interface· October 2022

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Simulation of receptor triggering by kinetic segregation shows role of oligomers and close contacts.
Robert Taylor, Jun Allard, Elizabeth L Read

Biophys J· May 2022

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Plant silicon application alters leaf alkaloid concentrations and impacts parasitoids more adversely than their aphid hosts.
Casey R Hall, Rhiannon C Rowe, Meena Mikhael, Elizabeth Read, Sue E Hartley

Oecologia· May 2021

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Author Correction: New insights into cheddar cheese microbiota-metabolome relationships revealed by integrative analysis of multi-omics data.
Roya Afshari, Christopher J Pillidge, Elizabeth Read, Simone Rochfort, Daniel A Dias

Sci Rep· January 2021

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Balint-style reflective practice groups in a year 4 undergraduate general practice attachment: experience of the first two years.
Helen Richards, Adam Polnay, Peter Wilkinson, Elizabeth Read, Hilary Young

Scott Med J· May 2020

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Stochastic modeling reveals kinetic heterogeneity in post-replication DNA methylation.
Luis Busto-Moner, Julien Morival, Honglei Ren, Arjang Fahim, Zachary Reitz, Elizabeth L Read

PLoS Comput Biol· April 2020

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New insights into cheddar cheese microbiota-metabolome relationships revealed by integrative analysis of multi-omics data.
Roya Afshari, Christopher J Pillidge, Elizabeth Read, Simone Rochfort, Daniel A Dias

Sci Rep· February 2020

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Identification and Distribution of Novel Metabolites of Lolitrem B in Mice by High-Resolution Mass Spectrometry.
Priyanka Reddy, Aaron Elkins, Joanne Hemsworth, Kathryn Guthridge, Simone Vassiliadis, Elizabeth Read

Molecules· January 2020

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Analysis of Single-Cell Gene Pair Coexpression Landscapes by Stochastic Kinetic Modeling Reveals Gene-Pair Interactions in Development.
Cameron P Gallivan, Honglei Ren, Elizabeth L Read

Front Genet· January 2020

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Tremorgenic effects and functional metabolomics analysis of lolitrem B and its biosynthetic intermediates.
Priyanka Reddy, Simone Rochfort, Elizabeth Read, Myrna Deseo, Emily Jaehne

Sci Rep· June 2019

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Hydrodynamics of transient cell-cell contact: The role of membrane permeability and active protrusion length.
Kai Liu, Brian Chu, Jay Newby, Elizabeth L Read, John Lowengrub

PLoS Comput Biol· April 2019

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Rare-event sampling of epigenetic landscapes and phenotype transitions.
Margaret J Tse, Brian K Chu, Cameron P Gallivan, Elizabeth L Read

PLoS Comput Biol· August 2018

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Preclinical studies for a phase 1 clinical trial of autologous hematopoietic stem cell gene therapy for sickle cell disease.
Fabrizia Urbinati, Jennifer Wherley, Sabine Geiger, Beatriz Campo Fernandez, Michael L Kaufman, Elizabeth Read

Cytotherapy· September 2017

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Solving Immunology?
Yoram Vodovotz, Ashley Xia, Elizabeth L Read, Josep Bassaganya-Riera, David A Hafler

Trends Immunol· February 2017

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Markov State Models of gene regulatory networks.
Brian K Chu, Margaret J Tse, Royce R Sato, Elizabeth L Read

BMC Syst Biol· February 2017

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Current Understanding of Acute Bovine Liver Disease in Australia.
Elizabeth Read, Jacqueline Edwards, Myrna Deseo, Grant Rawlin, Simone Rochfort

Toxins (Basel)· December 2016

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Regulation of macrophage polarization and plasticity by complex activation signals.
Tim D Smith, Margaret J Tse, Elizabeth L Read, Wendy F Liu

Integr Biol (Camb)· September 2016

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DNA-Binding Kinetics Determines the Mechanism of Noise-Induced Switching in Gene Networks.
Margaret J Tse, Brian K Chu, Mahua Roy, Elizabeth L Read

Biophys J· October 2015

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Use of multiplexed tandem PCR to estimate the prevalence and intensity of Theileria orientalis infections in cattle.
Piyumali K Perera, Robin B Gasser, Elizabeth Read, Jakob Malmo, Hanh Nguyen

Infect Genet Evol· June 2015

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Differences in the phenotype, cytokine gene expression profiles, and in vivo alloreactivity of T cells mobilized with plerixafor compared with G-CSF.
Andreas Lundqvist, Aleah L Smith, Yoshiyuki Takahashi, Susan Wong, Erkut Bahceci, Elizabeth J Read

J Immunol· December 2013

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Stochastic effects are important in intrahost HIV evolution even when viral loads are high.
Elizabeth L Read, Allison A Tovo-Dwyer, Arup K Chakraborty

Proc Natl Acad Sci U S A· November 2012

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Therapeutic potential of mesenchymal stem cells for severe acute lung injury.
Michael A Matthay, B Taylor Thompson, Elizabeth J Read, David H McKenna, Kathleen D Liu

Chest· October 2010

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Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection.
Andrej Kosmrlj, Elizabeth L Read, Ying Qi, Todd M Allen, Marcus Altfeld

Nature· May 2010

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