Publications by authors named "Emanuela Merelli"

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Automatic generation of pseudoknotted RNAs taxonomy.
Michela Quadrini, Luca Tesei, Emanuela Merelli

BMC Bioinformatics· June 2023

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RNA secondary structure factorization in prime tangles.
Daniele Marchei, Emanuela Merelli

BMC Bioinformatics· August 2022

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Agent-based models for detecting the driving forces of biomolecular interactions.
Stefano Maestri, Emanuela Merelli, Marco Pettini

Sci Rep· February 2022

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Agent-Based Learning Model for the Obesity Paradox in RCC.
Matteo Belenchia, Giacomo Rocchetti, Stefano Maestri, Alessia Cimadamore, Rodolfo Montironi, Emanuela Merelli

Front Bioeng Biotechnol· April 2021

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Machine learning models predicting multidrug resistant urinary tract infections using "DsaaS".
Alessio Mancini, Leonardo Vito, Elisa Marcelli, Marco Piangerelli, Renato De Leone, Emanuela Merelli

BMC Bioinformatics· August 2020

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ASPRAlign: a tool for the alignment of RNA secondary structures with arbitrary pseudoknots.
Michela Quadrini, Luca Tesei, Emanuela Merelli

Bioinformatics· June 2020

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Visualising 2-simplex formation in metabolic reactions.
Marco Piangerelli, Stefano Maestri, Emanuela Merelli

J Mol Graph Model· June 2020

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Publisher Correction: Process calculi may reveal the equivalence lying at the heart of RNA and proteins.
Stefano Maestri, Emanuela Merelli

Sci Rep· November 2019

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An algebraic language for RNA pseudoknots comparison.
Michela Quadrini, Luca Tesei, Emanuela Merelli

BMC Bioinformatics· April 2019

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Process calculi may reveal the equivalence lying at the heart of RNA and proteins.
Stefano Maestri, Emanuela Merelli

Sci Rep· January 2019

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Topolnogical classifier for detecting the emergence of epileptic seizures.
Marco Piangerelli, Matteo Rucco, Luca Tesei, Emanuela Merelli

BMC Res Notes· June 2018

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Neural hypernetwork approach for pulmonary embolism diagnosis.
Matteo Rucco, David Sousa-Rodrigues, Emanuela Merelli, Jeffrey H Johnson, Lorenzo Falsetti

BMC Res Notes· October 2015

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Topology driven modeling: the IS metaphor.
Emanuela Merelli, Marco Pettini, Mario Rasetti

Nat Comput· January 2015

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Modelling osteomyelitis.
Pietro Liò, Nicola Paoletti, Mohammad Ali Moni, Kathryn Atwell, Emanuela Merelli

BMC Bioinformatics· May 2013

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Agent-based models of cellular systems.
Nicola Cannata, Flavio Corradini, Emanuela Merelli, Luca Tesei

Methods Mol Biol· March 2013

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Multilevel computational modeling and quantitative analysis of bone remodeling.
Nicola Paoletti, Pietro Liò, Emanuela Merelli, Marco Viceconti

IEEE/ACM Trans Comput Biol Bioinform· January 2013

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Physio-environmental sensing and live modeling.
Filippo Castiglione, Vanessa Diaz, Andrea Gaggioli, Pietro Liò, Claudia Mazzà, Emanuela Merelli

Interact J Med Res· January 2013

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UBioLab: a web-laboratory for ubiquitous in-silico experiments.
Ezio Bartocci, Diletta Cacciagrano, Maria Rita Di Berardini, Emanuela Merelli, Leonardo Vito

J Integr Bioinform· July 2012

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An agent-based multilayer architecture for bioinformatics grids.
Ezio Bartocci, Diletta Cacciagrano, Nicola Cannata, Flavio Corradini, Emanuela Merelli

IEEE Trans Nanobioscience· June 2007

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Biowep: a workflow enactment portal for bioinformatics applications.
Paolo Romano, Ezio Bartocci, Guglielmo Bertolini, Flavio De Paoli, Domenico Marra, Emanuela Merelli

BMC Bioinformatics· March 2007

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BioWMS: a web-based Workflow Management System for bioinformatics.
Ezio Bartocci, Flavio Corradini, Emanuela Merelli, Lorenzo Scortichini

BMC Bioinformatics· March 2007

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Agents in bioinformatics, computational and systems biology.
Emanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno

Brief Bioinform· January 2007

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Time to organize the bioinformatics resourceome.
Nicola Cannata, Emanuela Merelli, Russ B Altman

PLoS Comput Biol· December 2005

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