Publications by authors named "Erik Splinter"

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Formalin-Fixed, Paraffin-Embedded-Targeted Locus Capture: A Next-Generation Sequencing Technology for Accurate DNA-Based Gene Fusion Detection in Bone and Soft Tissue Tumors.
Ellen Stelloo, Ruud W J Meijers, Joost F Swennenhuis, Amin Allahyar, Karima Hajo, Erik Splinter

J Mol Diagn· October 2023

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Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia.
Willem K Smits, Carlo Vermeulen, Rico Hagelaar, Shunsuke Kimura, Eric M Vroegindeweij, Erik Splinter

Cell Rep· April 2023

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Targeted locus amplification to develop robust patient-specific assays for liquid biopsies in pediatric solid tumors.
Lieke M J van Zogchel, Nathalie S M Lak, Nina U Gelineau, Irina Sergeeva, Ellen Stelloo, Erik Splinter

Front Oncol· April 2023

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Targeted Locus Amplification and Haplotyping.
Juliet W Lefferts, Vera Boersma, Marne C Hagemeijer, Karima Hajo, Jeffrey M Beekman, Erik Splinter

Methods Mol Biol· November 2022

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Targeted locus amplification to detect molecular markers in mantle cell and follicular lymphoma.
Elisa Genuardi, Petra Klous, Barbara Mantoan, Daniela Drandi, Martina Ferrante, Erik Splinter

Hematol Oncol· August 2021

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Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing.
Amin Allahyar, Mark Pieterse, Joost Swennenhuis, G Tjitske Los-de Vries, Mehmet Yilmaz, Erik Splinter

Nat Commun· June 2021

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Enhanced CHO Clone Screening: Application of Targeted Locus Amplification and Next-Generation Sequencing Technologies for Cell Line Development.
Samuel H Aeschlimann, Christian Graf, Dmytro Mayilo, Hélène Lindecker, Lorena Urda, Erik Splinter

Biotechnol J· July 2019

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Large-scale discovery of mouse transgenic integration sites reveals frequent structural variation and insertional mutagenesis.
Leslie O Goodwin, Erik Splinter, Tiffany L Davis, Rachel Urban, Hao He

Genome Res· March 2019

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Genetic Screening Test to Detect Translocations in Acute Leukemias by Use of Targeted Locus Amplification.
Mohamed Z Alimohamed, Lennart F Johansson, Eddy N de Boer, Erik Splinter, Petra Klous

Clin Chem· July 2018

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X chromosome inactivation in a female carrier of a 1.28 Mb deletion encompassing the human X inactivation centre.
B de Hoon, Erik Splinter, B Eussen, J C W Douben, E Rentmeester

Philos Trans R Soc Lond B Biol Sci· November 2017

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Sensitive Monogenic Noninvasive Prenatal Diagnosis by Targeted Haplotyping.
Carlo Vermeulen, Geert Geeven, Elzo de Wit, Marjon J A M Verstegen, Rumo P M Jansen, Erik Splinter

Am J Hum Genet· September 2017

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Genetic and epigenetic features direct differential efficiency of Xist-mediated silencing at X-chromosomal and autosomal locations.
Agnese Loda, Johannes H Brandsma, Ivaylo Vassilev, Nicolas Servant, Friedemann Loos, Erik Splinter

Nat Commun· September 2017

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Efficient mapping of transgene integration sites and local structural changes in Cre transgenic mice using targeted locus amplification.
Carol Cain-Hom, Erik Splinter, Max van Min, Marieke Simonis, Monique van de Heijning

Nucleic Acids Res· May 2017

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Erratum to: Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.
Hendrik Marks, Hindrik H D Kerstens, Tahsin Stefan Barakat, Erik Splinter, René A M Dirks

Genome Biol· February 2016

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CTCF Binding Polarity Determines Chromatin Looping.
Elzo de Wit, Erica S M Vos, Sjoerd J B Holwerda, Christian Valdes-Quezada, Marjon J A M Verstegen, Erik Splinter

Mol Cell· November 2015

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Quantitative analysis of chromatin interaction changes upon a 4.3 Mb deletion at mouse 4E2.
Cinthya J Zepeda-Mendoza, Swagatam Mukhopadhyay, Emily S Wong, Nathalie Harder, Erik Splinter

BMC Genomics· November 2015

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Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.
Hendrik Marks, Hindrik H D Kerstens, Tahsin Stefan Barakat, Erik Splinter, René A M Dirks

Genome Biol· August 2015

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Targeted sequencing by proximity ligation for comprehensive variant detection and local haplotyping.
Paula J P de Vree, Elzo de Wit, Mehmet Yilmaz, Monique van de Heijning, Petra Klous, Erik Splinter

Nat Biotechnol· October 2014

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Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization.
Matthew Denholtz, Giancarlo Bonora, Constantinos Chronis, Erik Splinter, Wouter de Laat

Cell Stem Cell· November 2013

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The pluripotent genome in three dimensions is shaped around pluripotency factors.
Elzo de Wit, Britta A M Bouwman, Yun Zhu, Petra Klous, Erik Splinter

Nature· September 2013

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Allelic exclusion of the immunoglobulin heavy chain locus is independent of its nuclear localization in mature B cells.
Sjoerd J B Holwerda, Harmen J G van de Werken, Claudia Ribeiro de Almeida, Ingrid M Bergen, Marjolein J W de Bruijn, Erik Splinter

Nucleic Acids Res· August 2013

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4C technology: protocols and data analysis.
Harmen J G van de Werken, Paula J P de Vree, Erik Splinter, Sjoerd J B Holwerda, Petra Klous

Methods Enzymol· December 2012

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Determining long-range chromatin interactions for selected genomic sites using 4C-seq technology: from fixation to computation.
Erik Splinter, Elzo de Wit, Harmen J G van de Werken, Petra Klous, Wouter de Laat

Methods· November 2012

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Robust 4C-seq data analysis to screen for regulatory DNA interactions.
Harmen J G van de Werken, Gilad Landan, Sjoerd J B Holwerda, Michael Hoichman, Petra Klous, Erik Splinter

Nat Methods· October 2012

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A regulatory archipelago controls Hox genes transcription in digits.
Thomas Montavon, Natalia Soshnikova, Bénédicte Mascrez, Elisabeth Joye, Laurie Thevenet, Erik Splinter

Cell· November 2011

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