Publications by authors named "Ernest Retzel"

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Correction to: The transcriptome landscape of early maize meiosis.
Stefanie Dukowic-Schulze, Anitha Sundararajan, Joann Mudge, Thiruvarangan Ramaraj, Andrew D Farmer, Ernest F Retzel

BMC Plant Biol· January 2018

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The plant-specific protein FEHLSTART controls male meiotic entry, initializing meiotic synchronization in Arabidopsis.
Junhua Li, Stefanie Dukowic-Schulze, Ingrid E Lindquist, Andrew D Farmer, Bridget Kelly, Ernest F Retzel

Plant J· November 2015

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The transcriptome landscape of early maize meiosis.
Stefanie Dukowic-Schulze, Anitha Sundararajan, Joann Mudge, Thiruvarangan Ramaraj, Andrew D Farmer, Ernest F Retzel

BMC Plant Biol· May 2014

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Comparative transcriptomics of early meiosis in Arabidopsis and maize.
Stefanie Dukowic-Schulze, Anthony Harris, Junhua Li, Anitha Sundararajan, Joann Mudge, Ernest F Retzel

J Genet Genomics· March 2014

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Analyzing the meiotic transcriptome using isolated meiocytes of Arabidopsis thaliana.
Changbin Chen, Ernest F Retzel

Methods Mol Biol· September 2013

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Male-specific region of the bovine Y chromosome is gene rich with a high transcriptomic activity in testis development.
Ti-Cheng Chang, Yang Yang, Ernest F Retzel, Wan-Sheng Liu

Proc Natl Acad Sci U S A· July 2013

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Characterization of a set of novel meiotically-active promoters in Arabidopsis.
Junhua Li, Andrew D Farmer, Ingrid E Lindquist, Stefanie Dukowic-Schulze, Joann Mudge, Ernest F Retzel

BMC Plant Biol· July 2012

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The Medicago genome provides insight into the evolution of rhizobial symbioses.
Nevin D Young, Frédéric Debellé, Giles E D Oldroyd, Rene Geurts, Steven B Cannon, Ernest F Retzel

Nature· November 2011

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The expansion of the PRAME gene family in Eutheria.
Ti-Cheng Chang, Yang Yang, Hiroshi Yasue, Arvind K Bharti, Ernest F Retzel

PLoS One· February 2011

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ZNF280BY and ZNF280AY: autosome derived Y-chromosome gene families in Bovidae.
Yang Yang, Ti-Cheng Chang, Hiroshi Yasue, Arvind K Bharti, Ernest F Retzel

BMC Genomics· January 2011

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Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes.
Changbin Chen, Andrew D Farmer, Raymond J Langley, Joann Mudge, John A Crow, Ernest F Retzel

BMC Plant Biol· December 2010

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Reaching the depth of the Chinese hamster ovary cell transcriptome.
Nitya M Jacob, Anne Kantardjieff, Faraaz Noor Khan Yusufi, Ernest F Retzel, Bhanu Chandra Mulukutla

Biotechnol Bioeng· April 2010

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Legume Resources: MtDB and Medicago.Org.
Ernest F Retzel, James E Johnson, John A Crow, Anne F Lamblin, Charles E Paule

Methods Mol Biol· January 2009

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Management of High-Throughput DNA Sequencing Projects: Alpheus.
Neil A Miller, Stephen F Kingsmore, Andrew Farmer, Raymond J Langley, Joann Mudge, Ernest F Retzel

J Comput Sci Syst Biol· December 2008

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ForestTreeDB: a database dedicated to the mining of tree transcriptomes.
Nathalie Pavy, James J Johnson, John A Crow, Charles Paule, Timothy Kunau, Ernest F Retzel

Nucleic Acids Res· January 2007

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Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes.
Steven B Cannon, Lieven Sterck, Stephane Rombauts, Shusei Sato, Foo Cheung, Ernest F Retzel

Proc Natl Acad Sci U S A· October 2006

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Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.
Nathalie Pavy, Charles Paule, Lee Parsons, John A Crow, Marie-Josee Morency, Ernest Retzel

BMC Genomics· October 2005

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Databases and information integration for the Medicago truncatula genome and transcriptome.
Steven B Cannon, John A Crow, Michael L Heuer, Xiaohong Wang, Ethalinda K S Cannon, Ernest F Retzel

Plant Physiol· May 2005

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Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant.
Lila O Vodkin, Anupama Khanna, Robin Shealy, Steven J Clough, Delkin Orlando Gonzalez, Ernest Retzel

BMC Genomics· September 2004

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wCLUTO: a Web-enabled clustering toolkit.
Matthew D Rasmussen, Mukund S Deshpande, George Karypis, James Johnson, John A Crow, Ernest F Retzel

Plant Physiol· October 2003

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MGView: an alignment and visualization tool to enhance gap closure of microbial genomes.
Lisa Herron-Olson, John Freeman, Qing Zhang, Ernest F Retzel, Vivek Kapur

Nucleic Acids Res· September 2003

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TableView: portable genomic data visualization.
James E Johnson, Martina V Stromvik, Kevin A T Silverstein, John A Crow, Elizabeth Shoop, Ernest F Retzel

Bioinformatics· July 2003

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Novel gene expression profiles define the metabolic and physiological processes characteristic of wood and its extractive formation in a hardwood tree species, Robinia pseudoacacia.
Jaemo Yang, Sunchung Park, D Pascal Kamdem, Daniel E Keathley, Ernest Retzel

Plant Mol Biol· July 2003

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Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana.
Matias Kirst, Arthur F Johnson, Christie Baucom, Erin Ulrich, Kristy Hubbard, Ernest Retzel

Proc Natl Acad Sci U S A· June 2003

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MtDB: a database for personalized data mining of the model legume Medicago truncatula transcriptome.
Anne-Françoise J Lamblin, John A Crow, James E Johnson, Kevin A T Silverstein, Timothy M Kunau, Ernest F Retzel

Nucleic Acids Res· January 2003

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