Publications by authors named "Eva Fadrna"

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Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields.
Eva Fadrná, Nad'a Špačková, Joanna Sarzyñska, Jaroslav Koča, Modesto Orozco

J Chem Theory Comput· September 2009

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Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by molecular dynamics.
Kamila Réblová, Eva Fadrná, Joanna Sarzynska, Tadeusz Kulinski, Petr Kulhánek

Biophys J· December 2007

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Long-range electrostatic interactions in molecular dynamics: an endothelin-1 case study.
Eva Fadrná, Klára Hladecková, Jaroslav Koca

J Biomol Struct Dyn· October 2005

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Molecular dynamics simulations of Guanine quadruplex loops: advances and force field limitations.
Eva Fadrná, Nad'a Spacková, Richard Stefl, Jaroslav Koca, Thomas E Cheatham

Biophys J· July 2004

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Formation pathways of a guanine-quadruplex DNA revealed by molecular dynamics and thermodynamic analysis of the substates.
Richard Stefl, Thomas E Cheatham, Nad'a Spacková, Eva Fadrná, Imre Berger

Biophys J· September 2003

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Conformational flexibility of two RNA trimers explored by computational tools and database search.
Eva Fadrná, Jaroslav Koca

J Biomol Struct Dyn· April 2003

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