Publications by authors named "Eva Top"

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Not So Mosaic After All? The Core Genomes of IncP-1 Plasmids Evolve Predominantly Through Vertical Transmission.
David Sneddon, Clinton A Elg, Jack Sullivan, Eva M Top

bioRxiv· November 2025

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Evolution of a Plasmid Regulatory Circuit Ameliorates Plasmid Fitness Cost.
Clinton A Elg, Erin Mack, Michael Rolfsmeier, Thomas C McLean, David Sneddon, Christopher M Thomas, Eva M Top

Mol Biol Evol· April 2025

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Our friend and colleague Laura Frost: A brief tribute.
Beth Traxler, Eva Top

Plasmid· March 2025

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Epidemiological model can forecast COVID-19 outbreaks from wastewater-based surveillance in rural communities.
Tyler Meadows, Erik R Coats, Solana Narum, Eva M Top, Benjamin J Ridenhour

Water Res· January 2025

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Detection of rare plasmid hosts using a targeted Hi-C approach.
Salvador Castañeda-Barba, Benjamin J Ridenhour, Eva M Top, Thibault Stalder

ISME Commun· January 2025

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Comparative genomic analysis identifies potential adaptive variation in .
Kimberly R Andrews, Thomas E Besser, Thibault Stalder, Eva M Top, Katherine N Baker

Microb Genom· August 2024

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Evolution of a Plasmid Regulatory Circuit Ameliorates Plasmid Fitness Cost.
Clinton A Elg, Erin Mack, Michael Rolfsmeier, Thomas C McLean, Olivia Kosterlitz, Christopher M Thomas, Eva M Top

bioRxiv· May 2024

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Epidemiological model can forecast COVID-19 outbreaks from wastewater-based surveillance in rural communities.
Tyler Meadows, Erik R Coats, Solana Narum, Eva Top, Benjamin J Ridenhour

medRxiv· February 2024

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Plasmids, a molecular cornerstone of antimicrobial resistance in the One Health era.
Salvador Castañeda-Barba, Eva M Top, Thibault Stalder

Nat Rev Microbiol· January 2024

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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata.
Antonio Pedro Camargo, Lee Call, Simon Roux, Stephen Nayfach, Marcel Huntemann, Eva Top

Nucleic Acids Res· January 2024

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Host- plasmid network structure in wastewater is linked to antimicrobial resistance genes.
Alice Risely, Arthur Newbury, Thibault Stalder, Benno I Simmons, Eva M Top

Nat Commun· January 2024

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Evolutionary "Crowdsourcing": Alignment of Fitness Landscapes Allows for Cross-species Adaptation of a Horizontally Transferred Gene.
Olivia Kosterlitz, Nathan Grassi, Bailey Werner, Ryan Seamus McGee, Eva M Top

Mol Biol Evol· November 2023

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Plasmids on the move: Latest advances in Plasmid Biology from ISPB2022.
Jean-Yves Bouet, François Cornet, Eva Top

Plasmid· July 2023

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Polluted wetlands contain multidrug-resistance plasmids encoding CTX-M-type extended-spectrum β-lactamases.
Ryan T Botts, Dawne M Page, Joseph A Bravo, Madelaine L Brown, Claudia C Castilleja, Eva M Top

Plasmid· May 2023

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Biofilms preserve the transmissibility of a multi-drug resistance plasmid.
Genevieve A Metzger, Benjamin J Ridenhour, Michael France, Karol Gliniewicz, Jack Millstein, Eva M Top

NPJ Biofilms Microbiomes· December 2022

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Phage defence by deaminase-mediated depletion of deoxynucleotides in bacteria.
Brian Y Hsueh, Geoffrey B Severin, Clinton A Elg, Evan J Waldron, Abhiruchi Kant, Christopher R Rhoades, Eva M Top, Christopher M Waters

Nat Microbiol· August 2022

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Editorial: Plasmid transfer-mechanisms, ecology, evolution and applications.
Chin-Yi Chen, Clay Fuqua, Charlene R Jackson, Kristina Kadlec, Eva M Top

Front Microbiol· August 2022

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Estimating the transfer rates of bacterial plasmids with an adapted Luria-Delbrück fluctuation analysis.
Olivia Kosterlitz, Adamaris Muñiz Tirado, Claire Wate, Clint Elg, Ivana Bozic, Eva M Top

PLoS Biol· July 2022

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Long-Range PCR Reveals the Genetic Cargo of IncP-1 Plasmids in the Complex Microbial Community of an On-Farm Biopurification System Treating Pesticide-Contaminated Wastewater.
Vincent Dunon, Peter N Holmsgaard, Simone Dealtry, Rob Lavigne, Søren J Sørensen, Eva M Top

Appl Environ Microbiol· February 2022

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Contagious Antibiotic Resistance: Plasmid Transfer among Bacterial Residents of the Zebrafish Gut.
Wesley Loftie-Eaton, Angela Crabtree, David Perry, Jack Millstein, Justin Baytosh, Eva M Top

Appl Environ Microbiol· April 2021

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Biosolids as a Source of Antibiotic Resistance Plasmids for Commensal and Pathogenic Bacteria.
Aaron Law, Olubunmi Solano, Celeste J Brown, Samuel S Hunter, Matt Fagnan, Eva M Top

Front Microbiol· April 2021

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Dairy manure as a potential source of crop nutrients and environmental contaminants.
Danika Hill, Matthew J Morra, Thibault Stalder, Sven Jechalke, Eva Top

J Environ Sci (China)· February 2021

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Evolving Populations in Biofilms Contain More Persistent Plasmids.
Thibault Stalder, Brandon Cornwell, Jared Lacroix, Bethel Kohler, Seth Dixon, Eva M Top

Mol Biol Evol· June 2020

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Coevolution of host-plasmid pairs facilitates the emergence of novel multidrug resistance.
Hannah Jordt, Thibault Stalder, Olivia Kosterlitz, José M Ponciano, Eva M Top

Nat Ecol Evol· June 2020

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Editorial.
Eva M Top, Beth Traxler, Julian I Rood

Plasmid· September 2019

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