Publications by authors named "Evan Macosko"

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Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors.
Vignesh Shanmugam, Neriman Tokcan, Daniel Chafamo, Sean Sullivan, Mehdi Borji, Evan Macosko

Nat Commun· December 2025

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Cellular and Spatial Drivers of Unresolved Injury and Functional Decline in the Human Kidney.
Blue B Lake, Ricardo Melo Ferreira, Jens Hansen, Rajasree Menon, Jeannine Basta, Evan Z Macosko

bioRxiv· November 2025

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Elevated synaptic PKA activity and abnormal striatal dopamine signaling in Akap11 mutant mice, a genetic model of schizophrenia and bipolar disorder.
Bryan J Song, Yang Ge, Ally Nicolella, Min Jee Kwon, Bart Lodder, Evan Z Macosko

Nat Commun· November 2025

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Elevated synaptic PKA activity and abnormal striatal dopamine signaling in mutant mice, a genetic model of schizophrenia and bipolar disorder.
Bryan J Song, Yang Ge, Ally Nicolella, Min Jee Kwon, Bart Lodder, Evan Z Macosko

bioRxiv· November 2025

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Cassini: streamlined and scalable method for in situ profiling of RNA and protein.
Nicolas Lapique, Michael Taewoo Kim, Nicholas Thom, Naeem M Nadaf, Juan Pineda, Evan Z Macosko

Nat Commun· October 2025

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Pyramidal neurons proportionately alter the identity and survival of specific cortical interneuron subtypes.
Sherry Jingjing Wu, Min Dai, Shang-Po Yang, Cai McCann, Yanjie Qiu, Evan Z Macosko

bioRxiv· August 2025

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The neurexin gene family regulates olfactory glomerular formation.
Sung Jin Park, Namgyu Lee, I-Hao Wang, Hao-Ching Jiang, Thuyvan Luu, Evan Macosko

Cell Rep· August 2025

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Scalable spatial transcriptomics through computational array reconstruction.
Chenlei Hu, Mehdi Borji, Giovanni J Marrero, Vipin Kumar, Jackson A Weir, Evan Z Macosko

Nat Biotechnol· April 2025

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Author Correction: Dissection of artifactual and confounding glial signatures by single-cell sequencing of mouse and human brain.
Samuel E Marsh, Alec J Walker, Tushar Kamath, Lasse Dissing-Olesen, Timothy R Hammond, Evan Z Macosko

Nat Neurosci· January 2025

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Author Correction: Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery.
Boyan Bonev, Gonçalo Castelo-Branco, Fei Chen, Simone Codeluppi, M Ryan Corces, Evan Macosko

Nat Neurosci· January 2025

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Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors.
Vignesh Shanmugam, Neriman Tokcan, Daniel Chafamo, Sean Sullivan, Mehdi Borji, Evan Macosko

bioRxiv· January 2025

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Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery.
Boyan Bonev, Gonçalo Castelo-Branco, Fei Chen, Simone Codeluppi, M Ryan Corces, Evan Macosko

Nat Neurosci· December 2024

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HiDDEN: a machine learning method for detection of disease-relevant populations in case-control single-cell transcriptomics data.
Aleksandrina Goeva, Michael-John Dolan, Judy Luu, Eric Garcia, Rebecca Boiarsky, Evan Macosko

Nat Commun· November 2024

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Thyroid hormone remodels cortex to coordinate body-wide metabolism and exploration.
Daniel R Hochbaum, Lauren Hulshof, Amanda Urke, Wengang Wang, Alexandra C Dubinsky, Evan Z Macosko

Cell· October 2024

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Scalable imaging-free spatial genomics through computational reconstruction.
Chenlei Hu, Mehdi Borji, Giovanni J Marrero, Vipin Kumar, Jackson A Weir, Evan Z Macosko

bioRxiv· September 2024

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Pyramidal neurons proportionately alter the identity and survival of specific cortical interneuron subtypes.
Sherry Jingjing Wu, Min Dai, Shang-Po Yang, Cai McCann, Yanjie Qiu, Evan Z Macosko

Res Sq· August 2024

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Specialized connectivity of molecular layer interneuron subtypes leads to disinhibition and synchronous inhibition of cerebellar Purkinje cells.
Elizabeth P Lackey, Luis Moreira, Aliya Norton, Marie E Hemelt, Tomas Osorno, Evan Z Macosko

Neuron· July 2024

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Combinatorial expression of neurexin genes regulates glomerular targeting by olfactory sensory neurons.
Sung Jin Park, I-Hao Wang, Namgyu Lee, Hao-Ching Jiang, Takeshi Uemura, Evan Macosko

bioRxiv· April 2024

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Slide-tags enables single-nucleus barcoding for multimodal spatial genomics.
Andrew J C Russell, Jackson A Weir, Naeem M Nadaf, Matthew Shabet, Vipin Kumar, Evan Z Macosko

Nature· January 2024

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Publisher Correction: Slide-tags enables single-nucleus barcoding for multimodal spatial genomics.
Andrew J C Russell, Jackson A Weir, Naeem M Nadaf, Matthew Shabet, Vipin Kumar, Evan Z Macosko

Nature· January 2024

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The molecular cytoarchitecture of the adult mouse brain.
Jonah Langlieb, Nina S Sachdev, Karol S Balderrama, Naeem M Nadaf, Mukund Raj, Evan Z Macosko

Nature· December 2023

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Brain-region-specific changes in neurons and glia and dysregulation of dopamine signaling in Grin2a mutant mice.
Zohreh Farsi, Ally Nicolella, Sean K Simmons, Sameer Aryal, Nate Shepard, Evan Z Macosko

Neuron· November 2023

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A Purkinje cell to parabrachial nucleus pathway enables broad cerebellar influence over the forebrain.
Christopher H Chen, Leannah N Newman, Amanda P Stark, Katherine E Bond, Dawei Zhang, Evan Z Macosko

Nat Neurosci· November 2023

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Cerebellar circuits for disinhibition and synchronous inhibition.
Elizabeth P Lackey, Luis Moreira, Aliya Norton, Marie E Hemelt, Tomas Osorno, Evan Z Macosko

bioRxiv· September 2023

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Early Alzheimer's disease pathology in human cortex involves transient cell states.
Vahid Gazestani, Tushar Kamath, Naeem M Nadaf, Antonios Dougalis, S J Burris, Evan Z Macosko

Cell· September 2023

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