Publications by authors named "Frederic Plewniak"

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Water and soil contaminated by arsenic: the use of microorganisms and plants in bioremediation.
Philippe N Bertin, Simona Crognale, Frédéric Plewniak, Fabienne Battaglia-Brunet, Simona Rossetti

Environ Sci Pollut Res Int· February 2022

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Correction to: Water and soil contaminated by arsenic: the use of microorganisms and plants in bioremediation.
Philippe N Bertin, Simona Crognale, Frédéric Plewniak, Fabienne Battaglia-Brunet, Simona Rossetti

Environ Sci Pollut Res Int· February 2022

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Complete Genome Sequence of Stenotrophomonas maltophilia 1800, a New Bacterial Strain with Potential for Bioremediation of Oil-Contaminated Environments.
Annela Semai, Frédéric Plewniak, Joanna Lledo, Gwenolah Annonay, Céline Vandecasteele

Microbiol Resour Announc· February 2022

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Metatranscriptomic outlook on green and brown food webs in acid mine drainage.
Frédéric Plewniak, Simona Crognale, Odile Bruneel, Odile Sismeiro, Jean-Yves Coppée

Environ Microbiol Rep· October 2021

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Characterisation of hydrocarbon degradation, biosurfactant production, and biofilm formation in Serratia sp. Tan611: a new strain isolated from industrially contaminated environment in Algeria.
Annela Semai, Frédéric Plewniak, Armelle Charrié-Duhaut, Amalia Sayeh, Lisa Gil

Antonie Van Leeuwenhoek· April 2021

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Complete Genome Sequence of sp. Strain Nx66, Isolated from Waters Contaminated with Petrochemicals in El Saf-Saf Valley, Algeria.
Nardjess Chéraiti, Frédéric Plewniak, Salima Tighidet, Amalia Sayeh, Lisa Gil

Microbiol Resour Announc· November 2020

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In situ metabolic activities of uncultivated Ferrovum sp. CARN8 evidenced by metatranscriptomic analysis.
Frédéric Plewniak, Sandrine Koechler, Denis Le Paslier, Marina Héry, Odile Bruneel

Res Microbiol· March 2020

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A Genomic Outlook on Bioremediation: The Case of Arsenic Removal.
Frédéric Plewniak, Simona Crognale, Simona Rossetti, Philippe N Bertin

Front Microbiol· April 2018

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Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks.
Sylvain Prigent, Clémence Frioux, Simon M Dittami, Sven Thiele, Abdelhalim Larhlimi, Frédéric Plewniak

PLoS Comput Biol· January 2017

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Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas.
Kelle C Freel, Martin C Krueger, Julien Farasin, Céline Brochier-Armanet, Valérie Barbe, Frédéric Plewniak

PLoS One· May 2016

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Arsenite response in Coccomyxa sp. Carn explored by transcriptomic and non-targeted metabolomic approaches.
Sandrine Koechler, Philippe N Bertin, Frédéric Plewniak, Raymonde Baltenweck, Corinne Casiot

Environ Microbiol· April 2016

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Thiomonas sp. CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea.
Julien Farasin, Jérémy Andres, Corinne Casiot, Valérie Barbe, Jacques Faerber, Frédéric Plewniak

Front Microbiol· October 2015

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Arsenic hypertolerance in the protist Euglena mutabilis is mediated by specific transporters and functional integrity maintenance mechanisms.
David Halter, Jérémy Andres, Frédéric Plewniak, Julie Poulain, Corinne Da Silva

Environ Microbiol· June 2015

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Constitutive arsenite oxidase expression detected in arsenic-hypertolerant Pseudomonas xanthomarina S11.
Sandrine Koechler, Florence Arsène-Ploetze, Céline Brochier-Armanet, Florence Goulhen-Chollet, Audrey Heinrich-Salmeron, Frédéric Plewniak

Res Microbiol· April 2015

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Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26.
Jérémy Andres, Florence Arsène-Ploetze, Valérie Barbe, Céline Brochier-Armanet, Jessica Cleiss-Arnold, Frédéric Plewniak

Genome Biol Evol· December 2013

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Metagenomic insights into microbial metabolism affecting arsenic dispersion in Mediterranean marine sediments.
Frédéric Plewniak, Sandrine Koechler, Benjamin Navet, Eric Dugat-Bony, Olivier Bouchez

Mol Ecol· October 2013

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Genome Sequence of Halomonas sp. Strain A3H3, Isolated from Arsenic-Rich Marine Sediments.
Sandrine Koechler, Frédéric Plewniak, Valérie Barbe, Fabienne Battaglia-Brunet, Bernard Jost

Genome Announc· October 2013

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Amylases without known homologues discovered in an acid mine drainage: significance and impact.
François Delavat, Vincent Phalip, Anne Forster, Frédéric Plewniak, Marie-Claire Lett

Sci Rep· September 2012

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Next generation sequencing for molecular diagnosis of neuromuscular diseases.
Nasim Vasli, Johann Böhm, Stéphanie Le Gras, Jean Muller, Cécile Pizot, Frédéric Plewniak

Acta Neuropathol· August 2012

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Surface properties and intracellular speciation revealed an original adaptive mechanism to arsenic in the acid mine drainage bio-indicator Euglena mutabilis.
David Halter, Corinne Casiot, Hermann J Heipieper, Frédéric Plewniak, Marie Marchal

Appl Microbiol Biotechnol· February 2012

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seqMINER: an integrated ChIP-seq data interpretation platform.
Tao Ye, Arnaud R Krebs, Mohamed-Amin Choukrallah, Celine Keime, Frederic Plewniak

Nucleic Acids Res· March 2011

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Database similarity searches.
Frédéric Plewniak

Methods Mol Biol· February 2009

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Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis.
Mohamed Radhouene Aniba, Sophie Siguenza, Anne Friedrich, Frédéric Plewniak, Olivier Poch

Brief Bioinform· January 2009

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ADCK3, an ancestral kinase, is mutated in a form of recessive ataxia associated with coenzyme Q10 deficiency.
Clotilde Lagier-Tourenne, Meriem Tazir, Luis Carlos López, Catarina M Quinzii, Mirna Assoum, Frédéric Plewniak

Am J Hum Genet· March 2008

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SAGETTARIUS: a program to reduce the number of tags mapped to multiple transcripts and to plan SAGE sequencing stages.
Laurent Bianchetti, Yan Wu, Eric Guerin, Frédéric Plewniak, Olivier Poch

Nucleic Acids Res· November 2007

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