Publications by authors named "Geo M Pertea"

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Transcriptome assembly from long-read RNA-seq alignments with StringTie2.
Sam Kovaka, Aleksey V Zimin, Geo M Pertea, Roham Razaghi, Steven L Salzberg, Mihaela Pertea

Genome Biol· December 2019

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The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae.
David B Neale, Patrick E McGuire, Nicholas C Wheeler, Kristian A Stevens, Marc W Crepeau, Geo M Pertea

G3 (Bethesda)· September 2017

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Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown.
Mihaela Pertea, Daehwan Kim, Geo M Pertea, Jeffrey T Leek, Steven L Salzberg

Nat Protoc· September 2016

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads.
Mihaela Pertea, Geo M Pertea, Corina M Antonescu, Tsung-Cheng Chang, Joshua T Mendell

Nat Biotechnol· March 2015

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Detection of lineage-specific evolutionary changes among primate species.
Mihaela Pertea, Geo M Pertea, Steven L Salzberg

BMC Bioinformatics· July 2011

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Comparative analyses of potato expressed sequence tag libraries.
Catherine M Ronning, Svetlana S Stegalkina, Robert A Ascenzi, Oleg Bougri, Amy L Hart, Geo M Pertea

Plant Physiol· February 2003

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