Publications by authors named "Harris Wang"

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Precise virulence inactivation using a CRISPR-associated transposase for combating Enterobacteriaceae gut pathogens.
Carlotta Ronda, Tyler Perdue, Logan Schwanz, Diego Rivera Gelsinger, Leonie Brockmann, Harris H Wang

Nat Biomed Eng· December 2025

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MCSPACE: inferring microbiome spatiotemporal dynamics from high-throughput co-localization data.
Gurdip Uppal, Guillaume Urtecho, Miles Richardson, Isin Y Comba, Jeongchan Lee, Harris H Wang

Microbiome· December 2025

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Engineered probiotic restores GLP-1 signaling to ameliorate fiber-deficiency exacerbated colitis.
Leonie Brockmann, Carlotta Ronda, Logan T Schwanz, Yiming Qu, Daniel W Shneider, Harris H Wang

Sci Adv· November 2025

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Metagenomic editing of commensal bacteria in vivo using CRISPR-associated transposases.
Diego Rivera Gelsinger, Carlotta Ronda, Junjie Ma, Om B Kar, Madeline Edwards, Harris H Wang

Science· November 2025

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Fecal exfoliome sequencing captures immune dynamics of the healthy and inflamed gut.
Yiming Huang, Yiwei Sun, Carlotta Ronda, Chrystal F Mavros, Jing Li, Harris H Wang

Nat Biotechnol· November 2025

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Combinatorial protein engineering identifies potent CRISPR activators with reduced toxicity.
Marla Giddins, Alexander F Kratz, Mark B De Los Santos, Antoine Forget, Richa Tiwari, Harris Wang

Nat Commun· November 2025

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Colibactin-producing promote carcinogenesis of gastroesophageal adenocarcinoma and simultaneously induce autophagy and differentiation.
Andrea Proaño-Vasco, David Obwegs, Kerstin Bruder, Céline Ritzkowski, Sophia Eichner, Kenneth K Wang, Timothy C Wang, Harris H Wang

bioRxiv· November 2025

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Ultrasound-MRI Agreement in Individuals Undergoing Surveillance of Fontan-associated Liver Disease.
Harris Wang, Derek Rubadeux, Andrew T Trout, Cara E Morin, Alexander R Opotowsky

J Comput Assist Tomogr· September 2025

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Loss of FXR or Bile Acid-dependent Inhibition Accelerate Carcinogenesis of Gastroesophageal Adenocarcinoma.
Theresa Baumeister, Andrea Proaño-Vasco, Amira Metwaly, Karin Kleigrewe, Alexander Kuznetsov, Harris H Wang, Timothy C Wang

Cell Mol Gastroenterol Hepatol· July 2025

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Diary of a cell in DNA 'chyrons'.
Chao Chen, Harris H Wang

Nat Chem Biol· April 2025

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Publisher Correction: SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome.
Miles Richardson, Shijie Zhao, Liyuan Lin, Ravi U Sheth, Yiming Qu, Harris H Wang

Nat Microbiol· March 2025

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SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome.
Miles Richardson, Shijie Zhao, Liyuan Lin, Ravi U Sheth, Yiming Qu, Harris H Wang

Nat Microbiol· February 2025

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SARS-CoV-2 omicron BA.2.87.1 exhibits higher susceptibility to serum neutralization than EG.5.1 and JN.1.
Qian Wang, Yicheng Guo, Logan T Schwanz, Ian A Mellis, Yiwei Sun, Harris H Wang

Emerg Microbes Infect· December 2024

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Bacteria Engineered to Produce Serotonin Modulate Host Intestinal Physiology.
Chrystal F Mavros, Mareike Bongers, Frederik B F Neergaard, Frank Cusimano, Yiwei Sun, Harris H Wang

ACS Synth Biol· December 2024

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MCSPACE: inferring microbiome spatiotemporal dynamics from high-throughput co-localization data.
Gurdip Uppal, Guillaume K Urtecho, Miles Richardson, Isin Y Comba, Jeongchan Lee, Harris H Wang

bioRxiv· December 2024

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Spatiotemporal dynamics during niche remodeling by super-colonizing microbiota in the mammalian gut.
Guillaume Urtecho, Thomas Moody, Yiming Huang, Ravi U Sheth, Miles Richardson, Harris H Wang

Cell Syst· November 2024

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Shifts in Serum Bile Acid Profiles Associated With Barrett's Esophagus and Stages of Progression to Esophageal Adenocarcinoma.
Aarti Kumar, Pranav Gwalani, Prasad G Iyer, Kenneth K Wang, Gary W Falk, Timothy C Wang, Harris H Wang

Clin Transl Gastroenterol· October 2024

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SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome.
Miles Richardson, Shijie Zhao, Ravi U Sheth, Liyuan Lin, Yiming Qu, Harris H Wang

bioRxiv· October 2024

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Stool Protein Mass Spectrometry Identifies Biomarkers for Early Detection of Diffuse-type Gastric Cancer.
Chi-Lee C Ho, Michael B Gilbert, Guillaume Urtecho, Hyoungjoo Lee, David A Drew, Harris H Wang

Cancer Prev Res (Phila)· August 2024

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Context-dependent role of group 3 innate lymphoid cells in mucosal protection.
Leandro P Araujo, Madeline Edwards, Koichiro Irie, Yiming Huang, Yoshinaga Kawano, Harris H Wang

Sci Immunol· August 2024

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GENTANGLE: integrated computational design of gene entanglements.
Jose Manuel Martí, Chloe Hsu, Charlotte Rochereau, Chenling Xu, Tomasz Blazejewski, Harris Wang

Bioinformatics· July 2024

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Microbiota metabolized Bile Acids accelerate Gastroesophageal Adenocarcinoma via FXR inhibition.
Theresa Baumeister, Andrea Proaño-Vasco, Amira Metwaly, Karin Kleigrewe, Alexander Kuznetsov, Harris H Wang, Timothy C Wang

bioRxiv· June 2024

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Bacterial genome engineering using CRISPR-associated transposases.
Diego Rivera Gelsinger, Phuc Leo H Vo, Sanne E Klompe, Carlotta Ronda, Harris H Wang

Nat Protoc· March 2024

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High-throughput transcriptomics of 409 bacteria-drug pairs reveals drivers of gut microbiota perturbation.
Deirdre Ricaurte, Yiming Huang, Ravi U Sheth, Diego Rivera Gelsinger, Andrew Kaufman, Harris H Wang

Nat Microbiol· February 2024

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Intestinal microbiota-specific Th17 cells possess regulatory properties and suppress effector T cells via c-MAF and IL-10.
Leonie Brockmann, Alexander Tran, Yiming Huang, Madeline Edwards, Carlotta Ronda, Harris H Wang

Immunity· December 2023

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