Publications by authors named "Heidi Imker"

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Institutional data repositories are vital.
Jen Darragh, Mikala R Narlock, Halle Burns, Peter A Cerda, Wind Cowles, Heidi Imker

Science· September 2024

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A machine learning-enabled open biodata resource inventory from the scientific literature.
Heidi J Imker, Kenneth E Schackart, Ana-Maria Istrate, Charles E Cook

PLoS One· November 2023

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Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks.
John A Gerlt, Jason T Bouvier, Daniel B Davidson, Heidi J Imker, Boris Sadkhin

Biochim Biophys Acta· August 2015

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The Pseudomonas aeruginosa antimetabolite L -2-amino-4-methoxy-trans-3-butenoic acid (AMB) is made from glutamate and two alanine residues via a thiotemplate-linked tripeptide precursor.
Nelson Rojas Murcia, Xiaoyun Lee, Patrice Waridel, Alessandro Maspoli, Heidi J Imker

Front Microbiol· March 2015

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A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis.
Tobias J Erb, Bradley S Evans, Kyuil Cho, Benjamin P Warlick, Jaya Sriram, Heidi J Imker

Nat Chem Biol· November 2012

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Mechanistic diversity in the RuBisCO superfamily: RuBisCO from Rhodospirillum rubrum is not promiscuous for reactions catalyzed by RuBisCO-like proteins.
Benjamin P E Warlick, Heidi J Imker, Jaya Sriram, F Robert Tabita, John A Gerlt

Biochemistry· November 2012

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1-methylthio-D-xylulose 5-phosphate methylsulfurylase: a novel route to 1-deoxy-D-xylulose 5-phosphate in Rhodospirillum rubrum.
Benjamin P Warlick, Bradley S Evans, Tobias J Erb, Udipi A Ramagopal, Jaya Sriram, Heidi J Imker

Biochemistry· October 2012

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Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Tiit Lukk, Ayano Sakai, Chakrapani Kalyanaraman, Shoshana D Brown, Heidi J Imker

Proc Natl Acad Sci U S A· March 2012

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The Enzyme Function Initiative.
John A Gerlt, Karen N Allen, Steven C Almo, Richard N Armstrong, Patricia C Babbitt, Heidi J Imker

Biochemistry· November 2011

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Activation of the pacidamycin PacL adenylation domain by MbtH-like proteins.
Wenjun Zhang, John R Heemstra, Christopher T Walsh, Heidi J Imker

Biochemistry· November 2010

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N-acylation during glidobactin biosynthesis by the tridomain nonribosomal peptide synthetase module GlbF.
Heidi J Imker, Daniel Krahn, Jérôme Clerc, Markus Kaiser, Christopher T Walsh

Chem Biol· October 2010

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SylC catalyzes ureido-bond formation during biosynthesis of the proteasome inhibitor syringolin A.
Heidi J Imker, Christopher T Walsh, William M Wuest

J Am Chem Soc· December 2009

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Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization.
Kui K Chan, B McKay Wood, Alexander A Fedorov, Elena V Fedorov, Heidi J Imker

Biochemistry· June 2009

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Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening.
Chakrapani Kalyanaraman, Heidi J Imker, Alexander A Fedorov, Elena V Fedorov, Margaret E Glasner

Structure· November 2008

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Mechanistic diversity in the RuBisCO superfamily: a novel isomerization reaction catalyzed by the RuBisCO-like protein from Rhodospirillum rubrum.
Heidi J Imker, Jaya Singh, Benjamin P Warlick, F Robert Tabita, John A Gerlt

Biochemistry· October 2008

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Prediction and assignment of function for a divergent N-succinyl amino acid racemase.
Ling Song, Chakrapani Kalyanaraman, Alexander A Fedorov, Elena V Fedorov, Margaret E Glasner, Heidi J Imker

Nat Chem Biol· August 2007

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Mechanistic diversity in the RuBisCO superfamily: the "enolase" in the methionine salvage pathway in Geobacillus kaustophilus.
Heidi J Imker, Alexander A Fedorov, Elena V Fedorov, Steven C Almo, John A Gerlt

Biochemistry· April 2007

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A disaccharide rearrangement catalyzed by molybdate anion in aqueous solution.
Qingquan Wu, Qingfeng Pan, Shikai Zhao, Heidi Imker, Anthony S Serianni

J Org Chem· April 2007

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