Publications by authors named "Inimary Toby"

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Optimizing clustering of CDR3 sequences using natural language processing, Word2Vec, and KMeans.
Sanskriti Baranwal, Ricardo Avila Sanchez, Clement-Andi Edet, Erick Chastain, Inimary Toby

Front Bioinform· October 2025

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No-boundary thinking for artificial intelligence in bioinformatics and education.
Prajay Patel, Nisha Pillai, Inimary Toby

Front Bioinform· January 2024

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Analysis of CDR3 Sequences from T-Cell Receptor β in Acute Respiratory Distress Syndrome.
Sara Hey, Dayjah Whyte, Minh-Chau Hoang, Nick Le, Joseph Natvig, Inimary T Toby

Biomolecules· May 2023

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Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference.
Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T Toby

Front Artif Intell· February 2022

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A Data Report on the Curation and Development of a Database of Genes for Acute Respiratory Distress Syndrome.
Erick Quintanilla, Kimberly Diwa, Ashley Nguyen, Lavang Vu, Inimary T Toby

Front Genet· December 2021

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Identification of potential antiviral compounds against SARS-CoV-2 structural and non structural protein targets: A pharmacoinformatics study of the CAS COVID-19 dataset.
Rolando García, Anas Hussain, Prasad Koduru, Murat Atis, Kathleen Wilson, Inimary Toby

Comput Biol Med· June 2021

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VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements.
Scott Christley, Walter Scarborough, Eddie Salinas, William H Rounds, Inimary T Toby

Front Immunol· July 2019

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Biophysicochemical Motifs in T-cell Receptor Sequences Distinguish Repertoires from Tumor-Infiltrating Lymphocyte and Adjacent Healthy Tissue.
Jared Ostmeyer, Scott Christley, Inimary T Toby, Lindsay G Cowell

Cancer Res· April 2019

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Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference.
Jonathan D Wren, Robert J Doerkson, Inimary T Toby, Bindu Nanduri, Ramin Homayouni

BMC Bioinformatics· March 2019

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Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
Jonathan D Wren, Mikhail G Dozmorov, Inimary Toby, Bindu Nanduri, Ramin Homayouni

BMC Bioinformatics· December 2017

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VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data.
Scott Christley, Mikhail K Levin, Inimary T Toby, John M Fonner, Nancy L Monson

BMC Bioinformatics· October 2017

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Statistical classifiers for diagnosing disease from immune repertoires: a case study using multiple sclerosis.
Jared Ostmeyer, Scott Christley, William H Rounds, Inimary Toby, Benjamin M Greenberg

BMC Bioinformatics· September 2017

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Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
Jonathan D Wren, Inimary Toby, Huxiao Hong, Bindu Nanduri, Rakesh Kaundal

BMC Bioinformatics· October 2016

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VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements.
Inimary T Toby, Mikhail K Levin, Edward A Salinas, Scott Christley, Sanchita Bhattacharya

BMC Bioinformatics· October 2016

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Divergence of protein-coding capacity and regulation in the Bacillus cereus sensu lato group.
Inimary T Toby, Jonah Widmer, David W Dyer

BMC Bioinformatics· January 2015

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Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis.
Susana Chavez-Bueno, Michael W Day, Inimary T Toby, Darrin R Akins, David W Dyer

Genome Announc· June 2014

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Bioinformatics tools available for K-12 students to engage in research.
Inimary Toby, Arthur Pope

Aviat Space Environ Med· April 2014

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Biological databases as research tools in the post-genomic era.
Inimary Toby

Aviat Space Environ Med· April 2012

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Translational research: an emerging trend in biomedical science.
Inimary Toby

Aviat Space Environ Med· June 2011

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Hypoxia-induced proliferation of human pulmonary microvascular endothelial cells depends on epidermal growth factor receptor tyrosine kinase activation.
Inimary T Toby, Louis G Chicoine, Hongmei Cui, Bernadette Chen, Leif D Nelin

Am J Physiol Lung Cell Mol Physiol· April 2010

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