Publications by authors named "Jared Ostmeyer"

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T-cell tolerant fraction as a predictor of immune-related adverse events.
Jared Ostmeyer, Jason Y Park, Mitchell S von Itzstein, David Hsiehchen, Farjana Fattah

J Immunother Cancer· August 2023

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Dynamic kernel matching for non-conforming data: A case study of T cell receptor datasets.
Jared Ostmeyer, Lindsay Cowell, Scott Christley

PLoS One· March 2023

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Association between Antibiotic Exposure and Systemic Immune Parameters in Cancer Patients Receiving Checkpoint Inhibitor Therapy.
Mitchell S von Itzstein, Amrit S Gonugunta, Thomas Sheffield, Jade Homsi, Jonathan E Dowell, Jared Ostmeyer

Cancers (Basel)· March 2022

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T Cell Receptor Repertoires Acquired Routine Pap Testing May Help Refine Cervical Cancer and Precancer Risk Estimates.
Scott Christley, Jared Ostmeyer, Lisa Quirk, Wei Zhang, Bradley Sirak

Front Immunol· September 2021

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Reconstituting T cell receptor selection in-silico.
Jared Ostmeyer, Lindsay Cowell, Benjamin Greenberg, Scott Christley

Genes Immun· July 2021

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Association between body mass index, dosing strategy, and efficacy of immune checkpoint inhibitors.
Murtaza Ahmed, Mitchell S von Itzstein, Thomas Sheffield, Shaheen Khan, Farjana Fattah, Jared Ostmeyer

J Immunother Cancer· June 2021

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Biophysicochemical motifs in T cell receptor sequences as a potential biomarker for high-grade serous ovarian carcinoma.
Jared Ostmeyer, Elena Lucas, Scott Christley, Jayanthi Lea, Nancy Monson

PLoS One· June 2020

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VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements.
Scott Christley, Walter Scarborough, Eddie Salinas, William H Rounds, Inimary T Toby, Jared Ostmeyer

Front Immunol· July 2019

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Biophysicochemical Motifs in T-cell Receptor Sequences Distinguish Repertoires from Tumor-Infiltrating Lymphocyte and Adjacent Healthy Tissue.
Jared Ostmeyer, Scott Christley, Inimary T Toby, Lindsay G Cowell

Cancer Res· April 2019

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Machine Learning on Sequential Data Using a Recurrent Weighted Average.
Jared Ostmeyer, Lindsay Cowell

Neurocomputing (Amst)· February 2019

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Rapid constriction of the selectivity filter underlies C-type inactivation in the KcsA potassium channel.
Jing Li, Jared Ostmeyer, Luis G Cuello, Eduardo Perozo, Benoît Roux

J Gen Physiol· October 2018

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Chemical substitutions in the selectivity filter of potassium channels do not rule out constricted-like conformations for C-type inactivation.
Jing Li, Jared Ostmeyer, Eliot Boulanger, Huan Rui, Eduardo Perozo

Proc Natl Acad Sci U S A· October 2017

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Statistical classifiers for diagnosing disease from immune repertoires: a case study using multiple sclerosis.
Jared Ostmeyer, Scott Christley, William H Rounds, Inimary Toby, Benjamin M Greenberg

BMC Bioinformatics· September 2017

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Probing the Effects of Gating on the Ion Occupancy of the K Channel Selectivity Filter Using Two-Dimensional Infrared Spectroscopy.
Huong T Kratochvil, Michał Maj, Kimberly Matulef, Alvin W Annen, Jared Ostmeyer

J Am Chem Soc· July 2017

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Instantaneous ion configurations in the K+ ion channel selectivity filter revealed by 2D IR spectroscopy.
Huong T Kratochvil, Joshua K Carr, Kimberly Matulef, Alvin W Annen, Hui Li, Jared Ostmeyer

Science· September 2016

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Quantitative analysis of the water occupancy around the selectivity filter of a K+ channel in different gating modes.
Markus Weingarth, Elwin A W van der Cruijsen, Jared Ostmeyer, Sylke Lievestro, Benoît Roux

J Am Chem Soc· February 2014

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Recovery from slow inactivation in K+ channels is controlled by water molecules.
Jared Ostmeyer, Sudha Chakrapani, Albert C Pan, Eduardo Perozo, Benoît Roux

Nature· September 2013

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Heuristically optimal path scanning for high-speed multiphoton circuit imaging.
Alexander J Sadovsky, Peter B Kruskal, Joseph M Kimmel, Jared Ostmeyer, Florian B Neubauer

J Neurophysiol· September 2011

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