Publications by authors named "Jacob Biesinger"

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The effect of Nipped-B-like (Nipbl) haploinsufficiency on genome-wide cohesin binding and target gene expression: modeling Cornelia de Lange syndrome.
Daniel A Newkirk, Yen-Yun Chen, Richard Chien, Weihua Zeng, Jacob Biesinger

Clin Epigenetics· May 2018

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Integrative ChIP-seq/microarray analysis identifies a CTNNB1 target signature enriched in intestinal stem cells and colon cancer.
Kazuhide Watanabe, Jacob Biesinger, Michael L Salmans, Brian S Roberts, William T Arthur

PLoS One· December 2014

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Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program.
William T Chiu, Rebekah Charney Le, Ira L Blitz, Margaret B Fish, Yi Li, Jacob Biesinger

Development· December 2014

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Discovering and mapping chromatin states using a tree hidden Markov model.
Jacob Biesinger, Yuanfeng Wang, Xiaohui Xie

BMC Bioinformatics· December 2013

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Biallelic genome modification in F(0) Xenopus tropicalis embryos using the CRISPR/Cas system.
Ira L Blitz, Jacob Biesinger, Xiaohui Xie, Ken W Y Cho

Genesis· December 2013

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Transcriptome-wide analyses of CstF64-RNA interactions in global regulation of mRNA alternative polyadenylation.
Chengguo Yao, Jacob Biesinger, Ji Wan, Lingjie Weng, Yi Xing

Proc Natl Acad Sci U S A· November 2012

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Genome-wide analysis of hepatic LRH-1 reveals a promoter binding preference and suggests a role in regulating genes of lipid metabolism in concert with FXR.
Hansook Kim Chong, Jacob Biesinger, Young-Kyo Seo, Xiaohui Xie, Timothy F Osborne

BMC Genomics· February 2012

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AREM: aligning short reads from ChIP-sequencing by expectation maximization.
Daniel Newkirk, Jacob Biesinger, Alvin Chon, Kyoko Yokomori, Xiaohui Xie

J Comput Biol· November 2011

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Genome-wide localization of SREBP-2 in hepatic chromatin predicts a role in autophagy.
Young-Kyo Seo, Tae-Il Jeon, Hansook Kim Chong, Jacob Biesinger, Xiaohui Xie

Cell Metab· April 2011

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A risk variant in an miR-125b binding site in BMPR1B is associated with breast cancer pathogenesis.
Pål Saetrom, Jacob Biesinger, Sierra M Li, David Smith, Laurent F Thomas

Cancer Res· September 2009

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