Publications by authors named "Jared Bischof"

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Expression of miR-18a and miR-210 in Normal Breast Tissue as Candidate Biomarkers of Breast Cancer Risk.
Ali Shidfar, Fabricio F Costa, Denise Scholtens, Jared M Bischof, Megan E Sullivan

Cancer Prev Res (Phila)· January 2017

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The MG-RAST metagenomics database and portal in 2015.
Andreas Wilke, Jared Bischof, Wolfgang Gerlach, Elizabeth Glass, Travis Harrison

Nucleic Acids Res· January 2016

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Metazen - metadata capture for metagenomes.
Jared Bischof, Travis Harrison, Tobias Paczian, Elizabeth Glass, Andreas Wilke

Stand Genomic Sci· March 2015

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A RESTful API for accessing microbial community data for MG-RAST.
Andreas Wilke, Jared Bischof, Travis Harrison, Tom Brettin, Mark D'Souza

PLoS Comput Biol· January 2015

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A metagenomics portal for a democratized sequencing world.
Andreas Wilke, Elizabeth M Glass, Daniela Bartels, Jared Bischof, Daniel Braithwaite

Methods Enzymol· April 2014

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A genome-wide analysis of open chromatin in human epididymis epithelial cells reveals candidate regulatory elements for genes coordinating epididymal function.
Jared M Bischof, Austin E Gillen, Lingyun Song, Nehal Gosalia, Darin London

Biol Reprod· October 2013

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Nucleosome mapping across the CFTR locus identifies novel regulatory factors.
Erbay Yigit, Jared M Bischof, Zhaolin Zhang, Christopher J Ott, Jenny L Kerschner

Nucleic Acids Res· March 2013

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A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function.
Jared M Bischof, Christopher J Ott, Shih-Hsing Leir, Nehal Gosalia, Lingyun Song

Thorax· May 2012

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Identification of microRNAs as potential prognostic markers in ependymoma.
Fabricio F Costa, Jared M Bischof, Elio F Vanin, Rishi R Lulla, Min Wang

PLoS One· February 2012

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Nucleosome occupancy reveals regulatory elements of the CFTR promoter.
Christopher J Ott, Jared M Bischof, Kristen M Unti, Austin E Gillen, Shih-Hsing Leir

Nucleic Acids Res· January 2012

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Identification of Differentially Expressed MicroRNAs in Osteosarcoma.
Rishi R Lulla, Fabricio F Costa, Jared M Bischof, Pauline M Chou, Maria de F Bonaldo

Sarcoma· November 2011

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Epigenetic reprogramming as a key contributor to melanocyte malignant transformation.
Fernanda Molognoni, Adriana T Cruz, Fabiana M Meliso, Alice S Morais, Camila F Souza, Jared M Bischof

Epigenetics· April 2011

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Folic acid remodels chromatin on Hes1 and Neurog2 promoters during caudal neural tube development.
Shunsuke Ichi, Fabricio F Costa, Jared M Bischof, Hiromichi Nakazaki, Yueh-Wei Shen

J Biol Chem· November 2010

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Multiple mechanisms influence regulation of the cystic fibrosis transmembrane conductance regulator gene promoter.
Marzena A Lewandowska, Fabricio F Costa, Jared M Bischof, Sarah H Williams, Marcelo B Soares

Am J Respir Cell Mol Biol· September 2010

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Transcriptional profiling of polycythemia vera identifies gene expression patterns both dependent and independent from the action of JAK2V617F.
Windy Berkofsky-Fessler, Monica Buzzai, Marianne K-H Kim, Steven Fruchtman, Vesna Najfeld, Jared M Bischof

Clin Cancer Res· September 2010

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Microenvironment alters epigenetic and gene expression profiles in Swarm rat chondrosarcoma tumors.
Christopher A Hamm, Jeff W Stevens, Hehuang Xie, Elio F Vanin, Jose A Morcuende, Jared M Bischof

BMC Cancer· September 2010

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Upregulation of mir-221 and mir-222 in atypical teratoid/rhabdoid tumors: potential therapeutic targets.
Simone Treiger Sredni, Maria de Fátima Bonaldo, Fabrício Falconi Costa, Chiang-Ching Huang, Christopher Allan Hamm, Jared Marshall Bischof

Childs Nerv Syst· March 2010

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Global demethylation of rat chondrosarcoma cells after treatment with 5-aza-2'-deoxycytidine results in increased tumorigenicity.
Christopher A Hamm, Hehuang Xie, Fabricio F Costa, Elio F Vanin, Elisabeth A Seftor, Jared Bischof

PLoS One· December 2009

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Epigenetically reprogramming metastatic tumor cells with an embryonic microenvironment.
Fabricio F Costa, Elisabeth A Seftor, Jared M Bischof, Dawn A Kirschmann, Luigi Strizzi

Epigenomics· December 2009

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SNP-based prediction of the human germ cell methylation landscape.
Hehuang Xie, Min Wang, Jared Bischof, Maria de Fatima Bonaldo, Marcelo Bento Soares

Genomics· May 2009

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The commonality of plasticity underlying multipotent tumor cells and embryonic stem cells.
Lynne-Marie Postovit, Fabricio F Costa, Jared M Bischof, Elisabeth A Seftor, Bo Wen

J Cell Biochem· July 2007

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Genome-wide identification of pseudogenes capable of disease-causing gene conversion.
Jared M Bischof, Annie P Chiang, Todd E Scheetz, Edwin M Stone, Thomas L Casavant

Hum Mutat· June 2006

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High-throughput gene discovery in the rat.
Todd E Scheetz, Jennifer J Laffin, Brian Berger, Sara Holte, Susan A Baumes, Jared Bischof

Genome Res· April 2004

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