Publications by authors named "Jason Lieb"

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Enhanced wet grip with North American river otter paws.
Alexis C Noel, Jason Lieb, Benjamin Seleb, Mary Thatcher, Soohwan Kim

Ann N Y Acad Sci· December 2024

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Phosphorylated Lamin A/C in the Nuclear Interior Binds Active Enhancers Associated with Abnormal Transcription in Progeria.
Kohta Ikegami, Stefano Secchia, Omar Almakki, Jason D Lieb, Ivan P Moskowitz

Dev Cell· March 2020

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Tissue- and strain-specific effects of a genotoxic carcinogen 1,3-butadiene on chromatin and transcription.
Jennifer W Israel, Grace A Chappell, Jeremy M Simon, Sebastian Pott, Alexias Safi, Jason D Lieb

Mamm Genome· February 2018

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Variation in DNA-Damage Responses to an Inhalational Carcinogen (1,3-Butadiene) in Relation to Strain-Specific Differences in Chromatin Accessibility and Gene Transcription Profiles in C57BL/6J and CAST/EiJ Mice.
Grace A Chappell, Jennifer W Israel, Jeremy M Simon, Sebastian Pott, Alexias Safi, Jason D Lieb

Environ Health Perspect· October 2017

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Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans.
Tess E Jeffers, Jason D Lieb

Genome Res· January 2017

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Cisplatin DNA damage and repair maps of the human genome at single-nucleotide resolution.
Jinchuan Hu, Jason D Lieb, Aziz Sancar, Sheera Adar

Proc Natl Acad Sci U S A· October 2016

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Chromatin profiling of Drosophila CNS subpopulations identifies active transcriptional enhancers.
Joseph C Pearson, Daniel J McKay, Jason D Lieb, Stephen T Crews

Development· October 2016

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Alterations to chromatin in intestinal macrophages link IL-10 deficiency to inappropriate inflammatory responses.
Jeremy M Simon, James P Davis, Saangyoung E Lee, Matthew R Schaner, Gregory R Gipson, Jason D Lieb

Eur J Immunol· August 2016

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A Transcriptional Lineage of the Early C. elegans Embryo.
Sophia C Tintori, Erin Osborne Nishimura, Patrick Golden, Jason D Lieb, Bob Goldstein

Dev Cell· August 2016

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Genome-wide kinetics of DNA excision repair in relation to chromatin state and mutagenesis.
Sheera Adar, Jinchuan Hu, Jason D Lieb, Aziz Sancar

Proc Natl Acad Sci U S A· April 2016

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The function and regulation of the GATA factor ELT-2 in the C. elegans endoderm.
Tobias Wiesenfahrt, Janette Y Berg, Erin Osborne Nishimura, Adam G Robinson, Barbara Goszczynski, Jason D Lieb

Development· February 2016

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Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo.
Katharine N Schulz, Eliana R Bondra, Arbel Moshe, Jacqueline E Villalta, Jason D Lieb

Genome Res· November 2015

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Single-cell ATAC-seq: strength in numbers.
Sebastian Pott, Jason D Lieb

Genome Biol· August 2015

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Histone modifications predispose genome regions to breakage and translocation.
Bharat Burman, Zhuzhu Z Zhang, Gianluca Pegoraro, Jason D Lieb, Tom Misteli

Genes Dev· July 2015

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Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution.
Jinchuan Hu, Sheera Adar, Christopher P Selby, Jason D Lieb, Aziz Sancar

Genes Dev· May 2015

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Asymmetric transcript discovery by RNA-seq in C. elegans blastomeres identifies neg-1, a gene important for anterior morphogenesis.
Erin Osborne Nishimura, Jay C Zhang, Adam D Werts, Bob Goldstein, Jason D Lieb

PLoS Genet· April 2015

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Correction: Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association.
Zhihao Ding, Yunyun Ni, Sander W Timmer, Bum-Kyu Lee, Anna Battenhouse, Jason D Lieb

PLoS Genet· April 2015

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STAT3 acts through pre-existing nucleosome-depleted regions bound by FOS during an epigenetic switch linking inflammation to cancer.
Joseph D Fleming, Paul G Giresi, Marianne Lindahl-Allen, Elsa B Krall, Jason D Lieb

Epigenetics Chromatin· March 2015

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Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy.
Vincent J Lynch, Mauris C Nnamani, Aurélie Kapusta, Kathryn Brayer, Silvia L Plaza, Jason D Lieb

Cell Rep· February 2015

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Interrogating the function of metazoan histones using engineered gene clusters.
Daniel J McKay, Stephen Klusza, Taylor J R Penke, Michael P Meers, Kaitlin P Curry, Jason D Lieb

Dev Cell· February 2015

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What are super-enhancers?
Sebastian Pott, Jason D Lieb

Nat Genet· January 2015

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A split personality for nucleosomes.
Daniel J McKay, Jason D Lieb

Cell· December 2014

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Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association.
Zhihao Ding, Yunyun Ni, Sander W Timmer, Bum-Kyu Lee, Anna Battenhouse, Jason D Lieb

PLoS Genet· November 2014

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Comparative analysis of metazoan chromatin organization.
Joshua W K Ho, Youngsook L Jung, Tao Liu, Burak H Alver, Soohyun Lee, Jason D Lieb

Nature· August 2014

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Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease.
Manolis Kellis, Barbara Wold, Michael P Snyder, Bradley E Bernstein, Anshul Kundaje, Jason D Lieb

Proc Natl Acad Sci U S A· August 2014

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