Publications by authors named "Jeremy D Edwards"

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Positive effects of public breeding on US rice yields under future climate scenarios.
Diane R Wang, Sajad Jamshidi, Rongkui Han, Jeremy D Edwards, Anna M McClung

Proc Natl Acad Sci U S A· March 2024

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Navigating rice seedling cold resilience: QTL mapping in two inbred line populations and the search for genes.
Michael R Schläppi, Avery R Jessel, Aaron K Jackson, Huy Phan, Melissa H Jia, Jeremy D Edwards

Front Plant Sci· December 2023

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Genetic loci regulating the concentrations of anthocyanins and proanthocyanidins in the pericarps of purple and red rice.
Ming-Hsuan Chen, Shannon R M Pinson, Aaron K Jackson, Jeremy D Edwards

Plant Genome· June 2023

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Identification of quantitative trait loci for tillering, root, and shoot biomass at the maximum tillering stage in rice.
Jinyoung Y Barnaby, Anna M McClung, Jeremy D Edwards, Shannon R M Pinson

Sci Rep· August 2022

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Breedbase: a digital ecosystem for modern plant breeding.
Nicolas Morales, Alex C Ogbonna, Bryan J Ellerbrock, Guillaume J Bauchet, Titima Tantikanjana, Jeremy D Edwards

G3 (Bethesda)· July 2022

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Assessment of Rice Sheath Blight Resistance Including Associations with Plant Architecture, as Revealed by Genome-Wide Association Studies.
Danting Li, Fantao Zhang, Shannon R M Pinson, Jeremy D Edwards, Aaron K Jackson

Rice (N Y)· June 2022

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Phenotypic Variation and the Impact of Admixture in the Species Complex ().
Georgia C Eizenga, HyunJung Kim, Janelle K H Jung, Anthony J Greenberg, Jeremy D Edwards

Front Plant Sci· June 2022

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Relationships Among Arsenic-Related Traits, Including Rice Grain Arsenic Concentration and Straighthead Resistance, as Revealed by Genome-Wide Association.
Shannon R M Pinson, D Jo Heuschele, Jeremy D Edwards, Aaron K Jackson, Santosh Sharma

Front Genet· March 2022

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Genomic prediction and QTL mapping of root system architecture and above-ground agronomic traits in rice (Oryza sativa L.) with a multitrait index and Bayesian networks.
Santosh Sharma, Shannon R M Pinson, David R Gealy, Jeremy D Edwards

G3 (Bethesda)· September 2021

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Gene disruption by structural mutations drives selection in US rice breeding over the last century.
Justin N Vaughn, Walid Korani, Joshua C Stein, Jeremy D Edwards, Daniel G Peterson

PLoS Genet· March 2021

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Grain Inorganic Arsenic Content in Rice Managed Through Targeted Introgressions and Irrigation Management.
Cristina P Fernández-Baca, Anna M McClung, Jeremy D Edwards, Eton E Codling, Vangimalla R Reddy

Front Plant Sci· January 2021

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Vis/NIR hyperspectral imaging distinguishes sub-population, production environment, and physicochemical grain properties in rice.
Jinyoung Y Barnaby, Trevis D Huggins, Hoonsoo Lee, Anna M McClung, Shannon R M Pinson, Jeremy D Edwards

Sci Rep· June 2020

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Phylogenetic origin and dispersal pattern of Taiwan weedy rice.
Dong-Hong Wu, David R Gealy, Melissa H Jia, Jeremy D Edwards, Ming-Hsin Lai

Pest Manag Sci· May 2020

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Identification of Superior Alleles for Seedling Stage Salt Tolerance in the USDA Rice Mini-Core Collection.
Jai S Rohila, Jeremy D Edwards, Gioi D Tran, Aaron K Jackson, Anna M McClung

Plants (Basel)· November 2019

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BrAPI-an application programming interface for plant breeding applications.
Peter Selby, Rafael Abbeloos, Jan Erik Backlund, Martin Basterrechea Salido, Guillaume Bauchet, Jeremy D Edwards

Bioinformatics· October 2019

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Association Analysis of Three Diverse Rice ( L.) Germplasm Collections for Loci Regulating Grain Quality Traits.
Trevis D Huggins, Ming-Hsuan Chen, Robert G Fjellstrom, Aaron K Jackson, Anna M McClung, Jeremy D Edwards

Plant Genome· March 2019

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Validation of Yield Component Traits Identified by Genome-Wide Association Mapping in a × Rice Biparental Mapping Population.
Georgia C Eizenga, Melissa H Jia, Aaron K Jackson, Debbie L Boykin, M Liakat Ali, Jeremy D Edwards

Plant Genome· March 2019

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The rice blast resistance gene Ptr encodes an atypical protein required for broad-spectrum disease resistance.
Haijun Zhao, Xueyan Wang, Yulin Jia, Bastian Minkenberg, Matthew Wheatley, Jeremy D Edwards

Nat Commun· May 2018

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Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis.
Ehsan Shakiba, Jeremy D Edwards, Farman Jodari, Sara E Duke, Angela M Baldo

PLoS One· September 2017

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The Sol Genomics Network (SGN)--from genotype to phenotype to breeding.
Noe Fernandez-Pozo, Naama Menda, Jeremy D Edwards, Surya Saha, Isaak Y Tecle

Nucleic Acids Res· January 2015

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solGS: a web-based tool for genomic selection.
Isaak Y Tecle, Jeremy D Edwards, Naama Menda, Chiedozie Egesi, Ismail Y Rabbi

BMC Bioinformatics· December 2014

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Analysis of wild-species introgressions in tomato inbreds uncovers ancestral origins.
Naama Menda, Susan R Strickler, Jeremy D Edwards, Aureliano Bombarely, Diane M Dunham

BMC Plant Biol· October 2014

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From manual curation to visualization of gene families and networks across Solanaceae plant species.
Anuradha Pujar, Naama Menda, Aureliano Bombarely, Jeremy D Edwards, Susan R Strickler

Database (Oxford)· October 2013

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The Tomato Yellow Leaf Curl Virus resistance genes Ty-1 and Ty-3 are allelic and code for DFDGD-class RNA-dependent RNA polymerases.
Maarten G Verlaan, Samuel F Hutton, Ragy M Ibrahem, Richard Kormelink, Richard G F Visser, Jeremy D Edwards

PLoS Genet· March 2013

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Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice.
Jeremy D Edwards, Jaroslav Janda, Megan T Sweeney, Ambika B Gaikwad, Bin Liu

Plant Methods· May 2008

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