Publications by authors named "Jin Jen"

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Non-random genetic alterations in the cyanobacterium Nostoc sp. exposed to space conditions.
Yuguang Liu, Patricio Jeraldo, William Herbert, Samantha McDonough, Bruce Eckloff, Jin Jen

Sci Rep· July 2022

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Direct comparison of circulating tumor DNA sequencing assays with targeted large gene panels.
Lizhi Yu, Gonzalo Lopez, John Rassa, Yixin Wang, Tara Basavanhally, Jin Jen

PLoS One· May 2022

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Whole genome sequencing of cyanobacterium sp. CCCryo 231-06 using microfluidic single cell technology.
Yuguang Liu, Patricio Jeraldo, William Herbert, Samantha McDonough, Bruce Eckloff, Jin Jen

iScience· May 2022

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Improved Characterization of Complex β-Globin Gene Cluster Structural Variants Using Long-Read Sequencing.
Aruna Rangan, Molly S Hein, William G Jenkinson, Tejaswi Koganti, Ross A Aleff, Jin Jen, Jennifer L Oliveira

J Mol Diagn· December 2021

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LPCAT1-TERT fusions are uniquely recurrent in epithelioid trophoblastic tumors and positively regulate cell growth.
Gavin R Oliver, Sofia Marcano-Bonilla, Jonathan Quist, Ezequiel J Tolosa, Eriko Iguchi, Jin Jen

PLoS One· November 2021

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Author Correction: Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study.
Jonathan Foox, Scott W Tighe, Charles M Nicolet, Justin M Zook, Marta Byrska-Bishop, Jin Jen, Jenny Xiang

Nat Biotechnol· November 2021

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Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study.
Jonathan Foox, Scott W Tighe, Charles M Nicolet, Justin M Zook, Marta Byrska-Bishop, Jin Jen, Jenny Xiang

Nat Biotechnol· September 2021

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Intratumor Epigenetic Heterogeneity-A Panel Gene Methylation Study in Thyroid Cancer.
Chaofan Zhu, Meiying Zhang, Qian Wang, Jin Jen, Baoguo Liu

Front Genet· September 2021

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RNA-Seq Reveals Differences in Expressed Tumor Mutation Burden in Colorectal and Endometrial Cancers with and without Defective DNA-Mismatch Repair.
Margaret A DiGuardo, Jaime I Davila, Rory A Jackson, Asha A Nair, Numrah Fadra, Jin Jen, Robert B Jenkins

J Mol Diagn· May 2021

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Chromosomal Junction Detection from Whole-Genome Sequencing on Formalin-Fixed, Paraffin-Embedded Tumors.
Stephen Murphy, James Smadbeck, Bruce Eckloff, Yean Lee, Sarah Johnson, Jin Jen

J Mol Diagn· April 2021

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Aberrant immunohistochemical expression of CD4 as a rare finding in metastatic melanoma.
Kyriakos Chatzopoulos, Daniel R O'Brien, Sotiris Sotiriou, Khashayarsha Khazaie, Jin Jen

J Cutan Pathol· December 2020

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Integrating genomic features for non-invasive early lung cancer detection.
Jacob J Chabon, Emily G Hamilton, David M Kurtz, Mohammad S Esfahani, Everett J Moding, Jin Jen, Kristin C Jensen

Nature· April 2020

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High frequency electrical stimulation promotes expression of extracellular matrix proteins from human astrocytes.
Jin Sung Jang, Chan-Il Choi, Jiwon Yi, Kim Butters, Inyong Kim, Jin Jen

Mol Biol Rep· August 2019

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Bacterial Single Cell Whole Transcriptome Amplification in Microfluidic Platform Shows Putative Gene Expression Heterogeneity.
Yuguang Liu, Patricio Jeraldo, Jin Sung Jang, Bruce Eckloff, Jin Jen

Anal Chem· July 2019

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Predicting Treatment Response Based on RNA Expression in Large Datasets.
Aaron S Mansfield, Jin Jen

Clin Cancer Res· March 2019

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Identification and Development of a Lung Adenocarcinoma PDX Model With STRN-ALK Fusion.
Hongzheng Ren, Xiaonan Hou, Patrick W Eiken, Jin Zhang, Karlyn E Pierson, Jin Jen

Clin Lung Cancer· March 2019

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Neoantigenic Potential of Complex Chromosomal Rearrangements in Mesothelioma.
Aaron S Mansfield, Tobias Peikert, James B Smadbeck, Julia B M Udell, Enrique Garcia-Rivera, Jin Jen

J Thorac Oncol· February 2019

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Molecular signatures of multiple myeloma progression through single cell RNA-Seq.
Jin Sung Jang, Ying Li, Amit Kumar Mitra, Lintao Bi, Alexej Abyzov, Jin Jen

Blood Cancer J· January 2019

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Constitutive Interferon Pathway Activation in Tumors as an Efficacy Determinant Following Oncolytic Virotherapy.
Cheyne Kurokawa, Ianko D Iankov, S Keith Anderson, Ileana Aderca, Alexey A Leontovich, Mark E Jentoft, Jin Jen

J Natl Cancer Inst· October 2018

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Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumors.
Jennifer L Winters, Jaime I Davila, Amber M McDonald, Asha A Nair, Numrah Fadra, Robert B Jenkins, Jin Jen

J Mol Diagn· July 2018

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Recurrent fusions in indolent T-cell lymphoproliferative disorder of the gastrointestinal tract.
Ayush Sharma, Naoki Oishi, Rebecca L Boddicker, Guangzhen Hu, Hailey K Benson, Jin Jen

Blood· May 2018

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A Comprehensive Approach to Sequence-oriented IsomiR annotation (CASMIR): demonstration with IsomiR profiling in colorectal neoplasia.
Chung Wah Wu, Jared M Evans, Shengbing Huang, Douglas W Mahoney, Brian A Dukek, Jin Jen

BMC Genomics· May 2018

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CX3CR1 identifies PD-1 therapy-responsive CD8+ T cells that withstand chemotherapy during cancer chemoimmunotherapy.
Yiyi Yan, Siyu Cao, Xin Liu, Susan M Harrington, Wendy E Bindeman, Jin Jen

JCI Insight· April 2018

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Gene Expression Signatures Characterized by Longitudinal Stability and Interindividual Variability Delineate Baseline Phenotypic Groups with Distinct Responses to Immune Stimulation.
Adam D Scheid, Virginia P Van Keulen, Sara J Felts, Steven C Neier, Sumit Middha, Jin Jen

J Immunol· March 2018

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Contraction of T cell richness in lung cancer brain metastases.
Aaron S Mansfield, Hongzheng Ren, Shari Sutor, Vivekananda Sarangi, Asha Nair, Jin Jen

Sci Rep· February 2018

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