Publications by authors named "John D Aitchison"

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Reevaluating the roles of PPARs and nuclear receptors in human peroxisome biology.
Fred D Mast, Richard A Rachubinski, John D Aitchison

J Cell Biol· December 2025

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Breaking Barriers: Respiratory Viral Strategies Targeting the Host's Nuclear Pore Complex and Nuclear Transport Pathways.
Yael Udi, John D Aitchison, Michael P Rout, Samson Obado

Mol Biol Cell· November 2025

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TOR and heat shock response pathways regulate peroxisome biogenesis during proteotoxic stress.
Nandini Shukla, Maxwell L Neal, Jean-Claude Farré, Fred D Mast, Rajasri Sarkar, John D Aitchison

Nat Commun· November 2025

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Host oxidative stress primes mycobacteria for rapid antibiotic resistance evolution.
Evan Pepper-Tunick, Vivek Srinivas, Fred D Mast, Song Li, Sagan Russ, John D Aitchison

bioRxiv· November 2025

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Early and opposing neutrophil and CD4 T cell responses shape pulmonary tuberculosis pathology.
Benjamin H Gern, Josepha M Klas, Kimberly A Foster, Molly E Kanagy, Sara B Cohen, John D Aitchison

J Exp Med· October 2025

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Exploiting host kinases to combat dengue virus infection and disease.
Natasha M Bourgeois, Ling Wei, Alexis Kaushansky, John D Aitchison

Antiviral Res· September 2025

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A multivariate cell-based liquid biopsy for lung nodule risk stratification: Analytical validation and early clinical evaluation.
Jason D Berndt, Fergal J Duffy, Mark D D'Ascenzo, Leslie R Miller, Yijun Qi, John D Aitchison

J Liq Biopsy· September 2025

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An Indicator Cell Assay-based Multivariate Blood Test for Early Detection of Alzheimer's Disease.
Yijun Sherry Qi, Leslie Rae Miller, Mark D D'Ascenzo, Jason D Berndt, G Adam Whitney, John D Aitchison

medRxiv· September 2025

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APOE protects against severe infection with Mycobacterium tuberculosis by restraining production of neutrophil extracellular traps.
Dong Liu, Dat Mai, Ana N Jahn, Tara A Murray, John D Aitchison

PLoS Pathog· June 2025

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Preclinical development of a replication-competent vesicular stomatitis virus-based Lassa virus vaccine candidate advanced into human clinical trials.
Christopher L Cooper, Gavin Morrow, Maoli Yuan, Thomas S Postler, Maxwell L Neal, John D Aitchison

EBioMedicine· April 2025

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A multivariate cell-based assay for blood-based diagnostics enhances lung cancer risk stratification.
Jason D Berndt, Fergal J Duffy, Mark D D'Ascenzo, Leslie R Miller, Yijun Qi, John D Aitchison

medRxiv· April 2025

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DeleteomeTools: utilizing a compendium of yeast deletion strain transcriptomes to identify co-functional genes.
Maxwell L Neal, Sanjeev K Choudhry, John D Aitchison

NAR Genom Bioinform· March 2025

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A Conditional Cas9 System for Stage-Specific Gene Editing in .
Sean T Windle, Maxwell L Neal, Fred D Mast, Stefan H I Kappe, John D Aitchison

bioRxiv· March 2025

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TOR and heat shock response pathways regulate peroxisome biogenesis during proteotoxic stress.
Nandini Shukla, Maxwell L Neal, Jean-Claude Farré, Fred D Mast, Linh Truong, John D Aitchison

bioRxiv· January 2025

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MBoC: An evolving champion of cell biology.
John D Aitchison

Mol Biol Cell· December 2024

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Systems-level reconstruction of kinase phosphosignaling networks regulating endothelial barrier integrity using temporal data.
Ling Wei, John D Aitchison, Alexis Kaushansky, Fred D Mast

NPJ Syst Biol Appl· November 2024

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Systems-level reconstruction of kinase phosphosignaling networks regulating endothelial barrier integrity using temporal data.
Ling Wei, John D Aitchison, Alexis Kaushansky, Fred D Mast

bioRxiv· October 2024

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APOE Protects Against Severe Infection with by Restraining Production of Neutrophil Extracellular Traps.
Dong Liu, Dat Mai, Ana N Jahn, Tara A Murray, John D Aitchison

bioRxiv· October 2024

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Automated, image-based quantification of peroxisome characteristics with perox-per-cell.
Maxwell L Neal, Nandini Shukla, Fred D Mast, Jean-Claude Farré, Therese M Pacio, John D Aitchison

Bioinformatics· July 2024

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SARS-CoV-2 Orf6 is positioned in the nuclear pore complex by Rae1 to inhibit nucleocytoplasmic transport.
Tadashi Makio, Ke Zhang, Nicole Love, Fred D Mast, Xue Liu, John D Aitchison

Mol Biol Cell· May 2024

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Nanobody repertoire generated against the spike protein of ancestral SARS-CoV-2 remains efficacious against the rapidly evolving virus.
Natalia E Ketaren, Fred D Mast, Peter C Fridy, Jean Paul Olivier, Tanmoy Sanyal, John D Aitchison

Elife· May 2024

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Multiple receptor tyrosine kinases regulate dengue infection of hepatocytes.
Natasha M Bourgeois, Ling Wei, Nhi N T Ho, Maxwell L Neal, Denali Seferos, John D Aitchison

Front Cell Infect Microbiol· April 2024

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Automated, image-based quantification of peroxisome characteristics with .
Maxwell L Neal, Nandini Shukla, Fred D Mast, Jean-Claude Farré, Therese M Pacio, John D Aitchison

bioRxiv· April 2024

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CD4-mediated immunity shapes neutrophil-driven tuberculous pathology.
Benjamin H Gern, Josepha M Klas, Kimberly A Foster, Sara B Cohen, Courtney R Plumlee, John D Aitchison

bioRxiv· April 2024

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Predicting host-based, synthetic lethal antiviral targets from omics data.
Jeannette P Staheli, Maxwell L Neal, Arti Navare, Fred D Mast, John D Aitchison

NAR Mol Med· January 2024

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