Publications by authors named "John Matese"

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Comprehensive single-cell transcriptome lineages of a proto-vertebrate.
Chen Cao, Laurence A Lemaire, Wei Wang, Peter H Yoon, Yoolim A Choi, John C Matese

Nature· July 2019

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Phylogenetic portrait of the Saccharomyces cerevisiae functional genome.
Patrick A Gibney, Mark J Hickman, Patrick H Bradley, John C Matese, David Botstein

G3 (Bethesda)· August 2013

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The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes.
Estienne C Swart, John R Bracht, Vincent Magrini, Patrick Minx, Xiao Chen, John C Matese

PLoS Biol· July 2013

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The distribution of stars most likely to harbor intelligent life.
Daniel P Whitmire, John J Matese

Astrobiology· September 2009

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Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast.
Matthew J Brauer, Curtis Huttenhower, Edoardo M Airoldi, Rachel Rosenstein, John C Matese

Mol Biol Cell· January 2008

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The Stanford Microarray Database: implementation of new analysis tools and open source release of software.
Janos Demeter, Catherine Beauheim, Jeremy Gollub, Tina Hernandez-Boussard, Heng Jin, John C Matese

Nucleic Acids Res· January 2007

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Comparative genomic hybridizations of Entamoeba strains reveal unique genetic fingerprints that correlate with virulence.
Preetam H Shah, Ryan C MacFarlane, Dhruva Bhattacharya, John C Matese, Janos Demeter

Eukaryot Cell· March 2005

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The Stanford Microarray Database accommodates additional microarray platforms and data formats.
Catherine A Ball, Ihab A B Awad, Janos Demeter, Jeremy Gollub, Joan M Hebert, John C Matese

Nucleic Acids Res· January 2005

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GeneXplorer: an interactive web application for microarray data visualization and analysis.
Christian A Rees, Janos Demeter, John C Matese, David Botstein, Gavin Sherlock

BMC Bioinformatics· October 2004

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Submission of microarray data to public repositories.
Catherine A Ball, Alvis Brazma, Helen Causton, Steve Chervitz, Ron Edgar, John C Matese

PLoS Biol· September 2004

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Standards for microarray data: an open letter.
Catherine Ball, Alvis Brazma, Helen Causton, Steve Chervitz, Ron Edgar, John C Matese

Environ Health Perspect· August 2004

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The Stanford Microarray Database: data access and quality assessment tools.
Jeremy Gollub, Catherine A Ball, Gail Binkley, Janos Demeter, David B Finkelstein, John C Matese

Nucleic Acids Res· January 2003

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SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data.
Maximilian Diehn, Gavin Sherlock, Gail Binkley, Heng Jin, John C Matese

Nucleic Acids Res· January 2003

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Identification of genes periodically expressed in the human cell cycle and their expression in tumors.
Michael L Whitfield, Gavin Sherlock, Alok J Saldanha, John I Murray, Catherine A Ball, John C Matese

Mol Biol Cell· June 2002

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Transcriptional programs activated by exposure of human prostate cancer cells to androgen.
Samuel E DePrimo, Maximilian Diehn, Joel B Nelson, Robert E Reiter, John Matese

Genome Biol· June 2002

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