Publications by authors named "Jonathan Koff"

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Corrigendum to "Particle size distribution of viable nebulized bacteriophage for the treatment of multi-drug resistant Pseudomonas aeruginosa" [Respiratory Medicine and Research 86 (2024) 101133].
Daniel L Thompson, Zoe Semersky, Richard Feinn, Pamela Huang, Paul E Turner, Jonathan L Koff

Respir Med Res· November 2025

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A ventilated perfused lung model platform to dissect the response of the lungs to viral infection.
I Deniz Derman, Mecit Altan Alioglu, Joseph Christakiran Moses, Zissis C Chroneos, Yasar Ozer Yilmaz, Jonathan Koff

Trends Biotechnol· July 2025

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Personalized inhaled bacteriophage therapy for treatment of multidrug-resistant Pseudomonas aeruginosa in cystic fibrosis.
Benjamin K Chan, Gail L Stanley, Kaitlyn E Kortright, Albert C Vill, Mrinalini Modak, Jonathan L Koff

Nat Med· May 2025

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Epidermal Growth Factor Receptor Regulates Beclin-1 in Hyperoxic Acute Lung Injury.
Zachary M Harris, Asawari Korde, Johad Khoury, Edward P Manning, Gail Stanley, Jonathan L Koff

bioRxiv· May 2025

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Changing Epidemiology of Pediatric Pulmonary Exacerbations in Cystic Fibrosis.
Yaron Fireizen, Mohamoud Ahmed, Timothy Vigers, Kathryn Akong, Julie Ryu, Jonathan Koff

Pediatr Pulmonol· March 2025

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Particle size distribution of viable nebulized bacteriophage for the treatment of multi-drug resistant Pseudomonas aeruginosa.
Daniel L Thompson, Zoe Semersky, Richard Feinn, Pamela Huang, Paul E Turner, Jonathan L Koff

Respir Med Res· November 2024

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Phage Therapy for Respiratory Infections: Opportunities and Challenges.
Arya Khosravi, Qingquan Chen, Arne Echterhof, Jonathan L Koff, Paul L Bollyky

Lung· June 2024

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Evaluation of a Virtual Reality-Based Open Educational Resource Software.
Silvia Würstle, Lisa-Marie Spanke, Niklas Mehlhase, Gail Stanley, Jonathan Koff

J Med Educ Curric Dev· April 2024

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Lytic bacteriophages induce the secretion of antiviral and proinflammatory cytokines from human respiratory epithelial cells.
Paula F Zamora, Thomas G Reidy, Catherine R Armbruster, Ming Sun, Daria Van Tyne, Jonathan L Koff

PLoS Biol· April 2024

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Human iPSC-Based Model of COPD to Investigate Disease Mechanisms, Predict SARS-COV-2 Outcome, and Test Preventive Immunotherapy.
Rania Dagher, Aigul Moldobaeva, Elise Gubbins, Sydney Clark, Mia Madel Alfajaro, Jonathan L Koff

Stem Cells· March 2024

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Novel Approaches to Multidrug-Resistant Infections in Cystic Fibrosis.
Thomas S Murray, Gail Stanley, Jonathan L Koff

Infect Dis Clin North Am· March 2024

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Optimized preparation pipeline for emergency phage therapy against Pseudomonas aeruginosa at Yale University.
Silvia Würstle, Alina Lee, Kaitlyn E Kortright, Franziska Winzig, William An, Jonathan L Koff

Sci Rep· February 2024

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Lytic bacteriophages interact with respiratory epithelial cells and induce the secretion of antiviral and proinflammatory cytokines.
Paula F Zamora, Thomas G Reidy, Catherine R Armbruster, Ming Sun, Daria Van Tyne, Jonathan L Koff

bioRxiv· February 2024

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Bacteriophage Therapy for Pan-Drug-Resistant in Two Persons With Cystic Fibrosis.
Andrea Hahn, Iman Sami, Hollis Chaney, Anastassios C Koumbourlis, Coralee Del Valle Mojica, Jonathan L Koff

J Investig Med High Impact Case Rep· November 2023

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Spatiotemporally organized immunomodulatory response to SARS-CoV-2 virus in primary human broncho-alveolar epithelia.
Diana Cadena Castaneda, Sonia Jangra, Marina Yurieva, Jan Martinek, Megan Callender, Jonathan Koff

iScience· August 2023

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A Novel Zinc (II) Porphyrin Is Synergistic with PEV2 Bacteriophage against Infections.
Jessica Geyer, Kristen A Krupa, Zachary M Harris, Ying Sun, Lokesh Sharma, Jonathan L Koff

Antibiotics (Basel)· April 2023

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Spatiotemporally organized immunomodulatory response to SARS-CoV-2 virus in primary human broncho-alveolar epithelia.
Diana Cadena Castaneda, Sonia Jangra, Marina Yurieva, Jan Martinek, Megan Callender, Jonathan Koff

bioRxiv· March 2023

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IFN- Is Protective in Cytokine Release Syndrome-associated Extrapulmonary Acute Lung Injury.
Ying Sun, Buqu Hu, Gail Stanley, Zachary M Harris, Samir Gautam, Jonathan L Koff

Am J Respir Cell Mol Biol· January 2023

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COVID-19 bacteremic co-infection is a major risk factor for mortality, ICU admission, and mechanical ventilation.
Michael John Patton, Carlos J Orihuela, Kevin S Harrod, Mohammad A N Bhuiyan, Paari Dominic, Jonathan L Koff

Crit Care· January 2023

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Novel Approaches to Multidrug-Resistant Infections in Cystic Fibrosis.
Thomas S Murray, Gail Stanley, Jonathan L Koff

Clin Chest Med· December 2022

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Inhaled Bacteriophage Therapy for Multi-Drug Resistant .
Franziska Winzig, Shiv Gandhi, Alina Lee, Silvia Würstle, Gail L Stanley, Jonathan L Koff

Yale J Biol Med· December 2022

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Epidermal Growth Factor Receptor Inhibition Is Protective in Hyperoxia-Induced Lung Injury.
Zachary M Harris, Ying Sun, John Joerns, Brian Clark, Buqu Hu, Jonathan L Koff

Oxid Med Cell Longev· October 2022

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Bronchial epithelium epithelial-mesenchymal plasticity forms aberrant basaloid-like cells in vitro.
Dinesh Babu Uthaya Kumar, Efthymios Motakis, Marina Yurieva, Vivek Kohar, Jan Martinek, Jonathan L Koff

Am J Physiol Lung Cell Mol Physiol· June 2022

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I-SPY COVID adaptive platform trial for COVID-19 acute respiratory failure: rationale, design and operations.
Daniel Clark Files, Michael A Matthay, Carolyn S Calfee, Neil R Aggarwal, Adam L Asare, Jonathan L Koff

BMJ Open· June 2022

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A neutrophil activation signature predicts critical illness and mortality in COVID-19.
Matthew L Meizlish, Alexander B Pine, Jason D Bishai, George Goshua, Emily R Nadelmann, Jonathan Koff

Blood Adv· March 2021

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