Publications by authors named "Jonathan Pillow"

Claim this Profile
R
Revisiting the high-dimensional geometry of population responses in the visual cortex.
Dean A Pospisil, Jonathan W Pillow

Proc Natl Acad Sci U S A· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
F
Fast Optimization of Robust Transcriptomics Embeddings using Probabilistic Inference Autoencoder Networks for multi-Omics.
Ning Wang, David Turner, Hannah Feinberg, Victor Eduardo Nieto Caballero, Dan Yuan, Jonathan W Pillow

bioRxiv· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Identifying the factors governing internal state switches during nonstationary sensory decision-making.
Zeinab Mohammadi, Zoe C Ashwood, , Jonathan W Pillow

Nat Commun· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Continuous partitioning of neuronal variability.
Anuththara Rupasinghe, Adam S Charles, Jonathan W Pillow

bioRxiv· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
L
Learning neural dynamics through instructive signals.
Rich Pang, Juncal Arbelaiz, Jonathan W Pillow

bioRxiv· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Improved inference of latent neural states from calcium imaging data.
Stephen Keeley, David Zoltowski, Adam Charles, Jonathan Pillow

bioRxiv· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Internal states emerge early during learning of a perceptual decision-making task.
Lenca I Cuturela, , Jonathan W Pillow

bioRxiv· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Brain-wide representations of prior information in mouse decision-making.
Charles Findling, Félix Hubert, , Luigi Acerbi, Brandon Benson, Jonathan Pillow

Nature· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Bridging the gap between the connectome and whole-brain activity in .
Matthew S Creamer, Andrew M Leifer, Jonathan W Pillow

bioRxiv· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Inferring learning rules during de novo task learning.
Victor Geadah, Jonathan W Pillow

bioRxiv· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
State-switching navigation strategies inare beneficial for chemotaxis.
Kevin S Chen, Jonathan W Pillow, Andrew M Leifer

ArXiv· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Inferring internal states across mice and monkeys using facial features.
Alejandro Tlaie, Muad Y Abd El Hay, Berkutay Mert, Robert Taylor, Pierre-Antoine Ferracci, Jonathan W Pillow

Nat Commun· June 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Inferring neural population codes for acoustic communication.
Rich Pang, Christa A Baker, Mala Murthy, Jonathan Pillow

Proc Natl Acad Sci U S A· May 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Individual variability of neural computations underlying flexible decisions.
Marino Pagan, Vincent D Tang, Mikio C Aoi, Jonathan W Pillow, Valerio Mante

Nature· March 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
Navigation strategies in Caenorhabditis elegans are differentially altered by learning.
Kevin S Chen, Anuj K Sharma, Jonathan W Pillow, Andrew M Leifer

PLoS Biol· March 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Modeling Neural Activity with Conditionally Linear Dynamical Systems.
Victor Geadah, Amin Nejatbakhsh, David Lipshutz, Jonathan W Pillow, Alex H Williams

ArXiv· February 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Aggression experience and observation promote shared behavioral and neural changes.
Jorge M Iravedra-Garcia, Eartha Mae Guthman, Lenca Cuturela, Edgar J Ocasio-Arce, Jonathan W Pillow

bioRxiv· December 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Sparse-Coding Variational Autoencoders.
Victor Geadah, Gabriel Barello, Daniel Greenidge, Adam S Charles, Jonathan W Pillow

Neural Comput· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Pre-existing visual responses in a projection-defined dopamine population explain individual learning trajectories.
Alejandro Pan-Vazquez, Yoel Sanchez Araujo, Brenna McMannon, Miranta Louka, Akhil Bandi, Jonathan W Pillow

Curr Biol· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Disentangling the Roles of Distinct Cell Classes with Cell-Type Dynamical Systems.
Aditi Jha, Diksha Gupta, Carlos D Brody, Jonathan W Pillow

bioRxiv· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Modeling Complex Animal Behavior with Latent State Inverse Reinforcement Learning.
Aditi Jha, Victor Geadah, Jonathan W Pillow

bioRxiv· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The fly connectome reveals a path to the effectome.
Dean A Pospisil, Max J Aragon, Sven Dorkenwald, Arie Matsliah, Amy R Sterling, Jonathan W Pillow

Nature· October 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
Neural population dynamics underlying evidence accumulation in multiple rat brain regions.
Brian DePasquale, Carlos D Brody, Jonathan W Pillow

Elife· August 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
CrossTalk rebuttal.
Jonathan W Pillow

J Physiol· May 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Mapping model units to visual neurons reveals population code for social behaviour.
Benjamin R Cowley, Adam J Calhoun, Nivedita Rangarajan, Elise Ireland, Maxwell H Turner, Jonathan W Pillow

Nature· May 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis