Publications by authors named "Jonathan Pritchard"

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The primate Major Histocompatibility Complex as a case study of gene family evolution.
Alyssa Lyn Fortier, Jonathan K Pritchard

Elife· December 2025

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Causal modelling of gene effects from regulators to programs to traits.
Mineto Ota, Jeffrey P Spence, Tony Zeng, Emma Dann, Nikhil Milind, Jonathan K Pritchard

Nature· December 2025

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Ribosome heterogeneity arising from common and rare rRNA sequence variants affects diverse human phenotypes.
Daphna Rothschild, Anil Raj, Jordan Brown, Nathaniel Thayer, Manuel Hotz, Jonathan K Pritchard

medRxiv· November 2025

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Specificity, length and luck drive gene rankings in association studies.
Jeffrey P Spence, Hakhamanesh Mostafavi, Mineto Ota, Nikhil Milind, Tamara Gjorgjieva, Jonathan K Pritchard

Nature· November 2025

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Investigating the role of neighborhood socioeconomic status and germline genetics on prostate cancer risk.
Jonathan Judd, Jeffrey P Spence, Jonathan K Pritchard, Linda Kachuri, John S Witte

HGG Adv· October 2025

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Simple scaling laws control the genetic architectures of human complex traits.
Yuval B Simons, Hakhamanesh Mostafavi, Huisheng Zhu, Courtney J Smith, Jonathan K Pritchard

PLoS Biol· October 2025

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The Primate Major Histocompatibility Complex: A Case Study of Gene Family Evolution.
Alyssa Lyn Fortier, Jonathan K Pritchard

bioRxiv· September 2025

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Gene regulatory network structure informs the distribution of perturbation effects.
Matthew Aguirre, Jeffrey P Spence, Guy Sella, Jonathan K Pritchard

PLoS Comput Biol· September 2025

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Ancient trans-species polymorphism at the Major Histocompatibility Complex in primates.
Alyssa Lyn Fortier, Jonathan K Pritchard

Elife· September 2025

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Haplotype analysis reveals pleiotropic disease associations in the HLA region.
Courtney J Smith, Satu Strausz, , Jeffrey P Spence, Hanna M Ollila, Jonathan K Pritchard

Am J Hum Genet· August 2025

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Regulatory network topology and the genetic architecture of gene expression.
Matthew Aguirre, Jeffrey P Spence, Guy Sella, Jonathan K Pritchard

bioRxiv· August 2025

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Buffering and non-monotonic behavior of gene dosage response curves for human complex traits.
Nikhil Milind, Courtney J Smith, Huisheng Zhu, Tamara Gjorgjieva, Jeffrey P Spence, Jonathan K Pritchard

medRxiv· August 2025

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Entangled States from Sparsely Coupled Spins for Metrology with Neutral Atoms.
Sridevi Kuriyattil, Pablo M Poggi, Jonathan D Pritchard, Johannes Kombe, Andrew J Daley

Phys Rev Lett· June 2025

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Characterizing selection on complex traits through conditional frequency spectra.
Roshni A Patel, Clemens L Weiß, Huisheng Zhu, Hakhamanesh Mostafavi, Yuval B Simons, Jonathan K Pritchard

Genetics· April 2025

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Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage.
Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard

Cell Genom· March 2025

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Speeding Up Quantum Measurement Using Space-Time Trade-Off.
Christopher Corlett, Ieva Čepaitė, Andrew J Daley, Cica Gustiani, Gerard Pelegrí, Jonathan D Pritchard

Phys Rev Lett· February 2025

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Central control of dynamic gene circuits governs T cell rest and activation.
Maya M Arce, Jennifer M Umhoefer, Nadia Arang, Sivakanthan Kasinathan, Jacob W Freimer, Jonathan K Pritchard

Nature· January 2025

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Causal modeling of gene effects from regulators to programs to traits: integration of genetic associations and Perturb-seq.
Mineto Ota, Jeffrey P Spence, Tony Zeng, Emma Dann, Alexander Marson, Jonathan K Pritchard

bioRxiv· January 2025

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Specificity, length, and luck: How genes are prioritized by rare and common variant association studies.
Jeffrey P Spence, Hakhamanesh Mostafavi, Mineto Ota, Nikhil Milind, Tamara Gjorgjieva, Jonathan K Pritchard

bioRxiv· December 2024

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Invasive Treatment Strategy for Older Patients with Myocardial Infarction.
Vijay Kunadian, Helen Mossop, Carol Shields, Michelle Bardgett, Philippa Watts, Jonathan Pritchard

N Engl J Med· November 2024

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Gene regulatory network inference from CRISPR perturbations in primary CD4 T cells elucidates the genomic basis of immune disease.
Joshua S Weinstock, Maya M Arce, Jacob W Freimer, Mineto Ota, Alexander Marson, Jonathan K Pritchard

Cell Genom· November 2024

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Diversity of ribosomes at the level of rRNA variation associated with human health and disease.
Daphna Rothschild, Teodorus Theo Susanto, Xin Sui, Jeffrey P Spence, Ramya Rangan, Jonathan K Pritchard

Cell Genom· September 2024

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Investigating the Role of Neighborhood Socioeconomic Status and Germline Genetics on Prostate Cancer Risk.
Jonathan Judd, Jeffrey P Spence, Jonathan K Pritchard, Linda Kachuri, John S Witte

medRxiv· August 2024

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Genetic variants affect diurnal glucose levels throughout the day.
Nasa Sinnott-Armstrong, Satu Strausz, Lea Urpa, Erik Abner, Jesse Valliere, Jonathan K Pritchard

bioRxiv· July 2024

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Haplotype Analysis Reveals Pleiotropic Disease Associations in the HLA Region.
Courtney J Smith, Satu Strausz, , Jeffrey P Spence, Hanna M Ollila, Jonathan K Pritchard

medRxiv· July 2024

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