Publications by authors named "Joshua Gilmore"

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Topological scoring of protein interaction networks.
Mihaela E Sardiu, Joshua M Gilmore, Brad D Groppe, Arnob Dutta, Laurence Florens

Nat Commun· March 2019

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FGF2 Antiproliferative Stimulation Induces Proteomic Dynamic Changes and High Expression of FOSB and JUNB in K-Ras-Driven Mouse Tumor Cells.
Francisca Nathalia de Luna Vitorino, Fabio Montoni, Jaqueline Neves Moreno, Bruno Ferreira de Souza, Mariana de Camargo Lopes, Joshua M Gilmore

Proteomics· September 2018

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WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.
Joshua M Gilmore, Mihaela E Sardiu, Brad D Groppe, Janet L Thornton, Xingyu Liu

PLoS One· July 2017

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Different phosphoisoforms of RNA polymerase II engage the Rtt103 termination factor in a structurally analogous manner.
Corey M Nemec, Fan Yang, Joshua M Gilmore, Corinna Hintermair, Yi-Hsuan Ho

Proc Natl Acad Sci U S A· May 2017

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Identification of Topological Network Modules in Perturbed Protein Interaction Networks.
Mihaela E Sardiu, Joshua M Gilmore, Brad Groppe, Laurence Florens, Michael P Washburn

Sci Rep· March 2017

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Chromatin remodeller Fun30 induces nucleosome disassembly to facilitate RNA polymerase II elongation.
Junwoo Lee, Eun Shik Choi, Hogyu David Seo, Keunsoo Kang, Joshua M Gilmore

Nat Commun· February 2017

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Composition and Function of Mutant Swi/Snf Complexes.
Arnob Dutta, Mihaela Sardiu, Madelaine Gogol, Joshua Gilmore, Daoyong Zhang

Cell Rep· February 2017

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Therapeutic Targeting of MLL Degradation Pathways in MLL-Rearranged Leukemia.
Kaiwei Liang, Andrew G Volk, Jeffrey S Haug, Stacy A Marshall, Ashley R Woodfin, Joshua M Gilmore

Cell· January 2017

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SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.
Kristopher W Brannan, Wenhao Jin, Stephanie C Huelga, Charles A S Banks, Joshua M Gilmore

Mol Cell· October 2016

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Assembly of the Elongin A Ubiquitin Ligase Is Regulated by Genotoxic and Other Stresses.
Juston C Weems, Brian D Slaughter, Jay R Unruh, Shawn M Hall, Merry B McLaird, Joshua M Gilmore

J Biol Chem· June 2015

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Characterization of human cyclin-dependent kinase 12 (CDK12) and CDK13 complexes in C-terminal domain phosphorylation, gene transcription, and RNA processing.
Kaiwei Liang, Xin Gao, Joshua M Gilmore, Laurence Florens, Michael P Washburn

Mol Cell Biol· March 2015

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Conserved abundance and topological features in chromatin-remodeling protein interaction networks.
Mihaela E Sardiu, Joshua M Gilmore, Brad D Groppe, Damir Herman, Sreenivasa R Ramisetty

EMBO Rep· January 2015

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Suberoylanilide hydroxamic acid (SAHA)-induced dynamics of a human histone deacetylase protein interaction network.
Mihaela E Sardiu, Karen T Smith, Brad D Groppe, Joshua M Gilmore, Anita Saraf

Mol Cell Proteomics· November 2014

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Swi/Snf dynamics on stress-responsive genes is governed by competitive bromodomain interactions.
Arnob Dutta, Madelaine Gogol, Jeong-Hoon Kim, Michaela Smolle, Swaminathan Venkatesh, Joshua Gilmore

Genes Dev· October 2014

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The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells.
Jesse L Cox, Phillip J Wilder, Joshua M Gilmore, Erin L Wuebben, Michael P Washburn

PLoS One· December 2013

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Role for human mediator subunit MED25 in recruitment of mediator to promoters by endoplasmic reticulum stress-responsive transcription factor ATF6α.
Dotan Sela, Juliana J Conkright, Lu Chen, Joshua Gilmore, Michael P Washburn

J Biol Chem· September 2013

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Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses.
Joshua M Gilmore, Mihaela E Sardiu, Swaminathan Venkatesh, Brent Stutzman, Allison Peak

Mol Cell Proteomics· April 2012

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Determination of protein interactome of transcription factor Sox2 in embryonic stem cells engineered for inducible expression of four reprogramming factors.
Zhiguang Gao, Jesse L Cox, Joshua M Gilmore, Briana D Ormsbee, Sunil K Mallanna

J Biol Chem· March 2012

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Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes.
Kenneth K Lee, Mihaela E Sardiu, Selene K Swanson, Joshua M Gilmore, Michael Torok

Mol Syst Biol· July 2011

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Proteomic analysis of Sox2-associated proteins during early stages of mouse embryonic stem cell differentiation identifies Sox21 as a novel regulator of stem cell fate.
Sunil K Mallanna, Briana D Ormsbee, Michelina Iacovino, Joshua M Gilmore, Jesse L Cox

Stem Cells· October 2010

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Advances in shotgun proteomics and the analysis of membrane proteomes.
Joshua M Gilmore, Michael P Washburn

J Proteomics· October 2010

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Determinants of affinity and activity of the anti-sigma factor AsiA.
Joshua M Gilmore, Ramona J Bieber Urbauer, Leonid Minakhin, Vladimir Akoyev, Michal Zolkiewski

Biochemistry· July 2010

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Determining protein complex connectivity using a probabilistic deletion network derived from quantitative proteomics.
Mihaela E Sardiu, Joshua M Gilmore, Michael J Carrozza, Bing Li, Jerry L Workman

PLoS One· October 2009

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Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation.
Amber L Mosley, Samantha G Pattenden, Michael Carey, Swaminathan Venkatesh, Joshua M Gilmore

Mol Cell· April 2009

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Multidimensional separations-based shotgun proteomics.
Marjorie L Fournier, Joshua M Gilmore, Skylar A Martin-Brown, Michael P Washburn

Chem Rev· August 2007

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