Publications by authors named "Joy L Fan"

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Cellular states associated with metastatic organotropism and survival in patients with pancreatic ductal adenocarcinoma.
Morteza Chalabi Hajkarim, Michael May, Amit Dipak Amin, Jacob Jamison, Somnath Tagore, Joy Linyue Fan

Nat Genet· November 2025

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Joint representation and visualization of derailed cell states with Decipher.
Achille Nazaret, Joy Linyue Fan, Vincent-Philippe Lavallée, Cassandra Burdziak, Andrew E Cornish

Genome Biol· July 2025

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Spatiotemporal Single-Cell Analysis Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease.
Lingting Shi, Ajna Uzuni, Ximi K Wang, Michael Pressler, David W Harle, Joy L Fan

bioRxiv· May 2025

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Starfysh integrates spatial transcriptomic and histologic data to reveal heterogeneous tumor-immune hubs.
Siyu He, Yinuo Jin, Achille Nazaret, Lingting Shi, Xueer Chen, Joy Linyue Fan, Kaylee W Fang

Nat Biotechnol· February 2025

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Joint representation and visualization of derailed cell states with Decipher.
Achille Nazaret, Joy Linyue Fan, Vincent-Philippe Lavallée, Cassandra Burdziak, Andrew E Cornish

bioRxiv· November 2024

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A thousand and one tumors: the promise of AI for cancer biology.
Joy Linyue Fan, Achille Nazaret, Elham Azizi

Nat Methods· August 2024

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Multimodal single-cell and whole-genome sequencing of small, frozen clinical specimens.
Yiping Wang, Joy Linyue Fan, Johannes C Melms, Amit Dipak Amin, Yohanna Georgis

Nat Genet· January 2023

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