Publications by authors named "Kate B Cook"

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Transcriptional benchmark dose modeling of ultraviolet radiation-induced genomic activation in mouse skin.
Sami S Qutob, Samantha P M Roesch, Sandy Smiley, Pascale V Bellier, Andrew Williams, Kate B Cook

Photochem Photobiol· November 2025

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Transcriptome analysis in mouse skin after exposure to ultraviolet radiation from a canopy sunbed.
Sami S Qutob, Samantha P M Roesch, Sandy Smiley, Pascale Bellier, Andrew Williams, Kate B Cook

Photochem Photobiol· September 2024

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Measuring significant changes in chromatin conformation with ACCOST.
Kate B Cook, Borislav H Hristov, Karine G Le Roch, Jean Philippe Vert, William Stafford Noble

Nucleic Acids Res· March 2020

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Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages.
Evelien M Bunnik, Kate B Cook, Nelle Varoquaux, Gayani Batugedara, Jacques Prudhomme

Nat Commun· May 2018

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RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection.
Kate B Cook, Shankar Vembu, Kevin C H Ha, Hong Zheng, Kaitlin U Laverty

Methods· August 2017

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The Crystal Structure of the NHL Domain in Complex with RNA Reveals the Molecular Basis of Drosophila Brain-Tumor-Mediated Gene Regulation.
Inga Loedige, Leonhard Jakob, Thomas Treiber, Debashish Ray, Mathias Stotz, Kate B Cook

Cell Rep· November 2015

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Brain tumor is a sequence-specific RNA-binding protein that directs maternal mRNA clearance during the Drosophila maternal-to-zygotic transition.
John D Laver, Xiao Li, Debashish Ray, Kate B Cook, Noah A Hahn

Genome Biol· May 2015

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Paralogs hnRNP L and hnRNP LL exhibit overlapping but distinct RNA binding constraints.
Sarah A Smith, Debashish Ray, Kate B Cook, Michael J Mallory, Timothy R Hughes

PLoS One· February 2015

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High-throughput characterization of protein-RNA interactions.
Kate B Cook, Timothy R Hughes, Quaid D Morris

Brief Funct Genomics· January 2015

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A compendium of RNA-binding motifs for decoding gene regulation.
Debashish Ray, Hilal Kazan, Kate B Cook, Matthew T Weirauch, Hamed S Najafabadi

Nature· July 2013

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RBPDB: a database of RNA-binding specificities.
Kate B Cook, Hilal Kazan, Khalid Zuberi, Quaid Morris, Timothy R Hughes

Nucleic Acids Res· January 2011

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