Publications by authors named "Quaid D Morris"

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CisBP-RNA: a web resource for eukaryotic RNA-binding proteins and their motifs.
Diego A Rosado-Tristani, Mihai Albu, Xiaoting Chen, Alexander Sasse, Kaitlin U Laverty, Quaid D Morris

Nucleic Acids Res· October 2025

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Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction.
Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle M G Espiritu, Hongjiu Zhang, Quaid D Morris

Nat Biotechnol· April 2025

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SON is an essential mA target for hematopoietic stem cell fate.
Hanzhi Luo, Mariela Cortés-López, Cyrus L Tam, Michael Xiao, Isaac Wakiro, Quaid D Morris

Cell Stem Cell· December 2023

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Author Correction: The evolutionary history of 2,658 cancers.
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C Dentro, Santiago Gonzalez, Quaid D Morris

Nature· February 2023

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Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, Quaid D Morris

Nat Commun· December 2022

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Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig.
Yulia Rubanova, Ruian Shi, Caitlin F Harrigan, Roujia Li, Jeff Wintersinger, Quaid D Morris

Nat Commun· December 2022

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A practical guide to cancer subclonal reconstruction from DNA sequencing.
Maxime Tarabichi, Adriana Salcedo, Amit G Deshwar, Máire Ni Leathlobhair, Jeff Wintersinger, Quaid D Morris

Nat Methods· February 2021

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Quantifying the influence of mutation detection on tumour subclonal reconstruction.
Lydia Y Liu, Vinayak Bhandari, Adriana Salcedo, Shadrielle M G Espiritu, Quaid D Morris

Nat Commun· December 2020

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The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation.
Adam Kosti, Patricia Rosa de Araujo, Wei-Qing Li, Gabriela D A Guardia, Jennifer Chiou, Quaid D Morris

Genome Biol· August 2020

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Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig.
Yulia Rubanova, Ruian Shi, Caitlin F Harrigan, Roujia Li, Jeff Wintersinger, Quaid D Morris

Nat Commun· February 2020

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A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, Quaid D Morris

Nat Commun· February 2020

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Similarity regression predicts evolution of transcription factor sequence specificity.
Samuel A Lambert, Ally W H Yang, Alexander Sasse, Gwendolyn Cowley, Mihai Albu, Quaid D Morris

Nat Genet· June 2019

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ARGLU1 is a transcriptional coactivator and splicing regulator important for stress hormone signaling and development.
Lilia Magomedova, Jens Tiefenbach, Emma Zilberman, Florian Le Billan, Veronique Voisin, Quaid D Morris

Nucleic Acids Res· April 2019

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Motif models for RNA-binding proteins.
Alexander Sasse, Kaitlin U Laverty, Timothy R Hughes, Quaid D Morris

Curr Opin Struct Biol· December 2018

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Neutral tumor evolution?
Maxime Tarabichi, Iñigo Martincorena, Moritz Gerstung, Armand M Leroi, Florian Markowetz, Quaid D Morris

Nat Genet· December 2018

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The TRIM-NHL protein NHL-2 is a co-factor in the nuclear and somatic RNAi pathways in . e.
Gregory M Davis, Shikui Tu, Joshua Wt Anderson, Rhys N Colson, Menachem J Gunzburg, Quaid D Morris

Elife· December 2018

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A Chemical Biology Approach to Model Pontocerebellar Hypoplasia Type 1B (PCH1B).
Liberty François-Moutal, Shahriyar Jahanbakhsh, Andrew D L Nelson, Debashish Ray, David D Scott, Quaid D Morris

ACS Chem Biol· October 2018

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The Evolutionary Landscape of Localized Prostate Cancers Drives Clinical Aggression.
Shadrielle Melijah G Espiritu, Lydia Y Liu, Yulia Rubanova, Vinayak Bhandari, Erle M Holgersen, Quaid D Morris

Cell· May 2018

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RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection.
Kate B Cook, Shankar Vembu, Kevin C H Ha, Hong Zheng, Kaitlin U Laverty, Quaid D Morris

Methods· August 2017

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Oncogenic Activation of the RNA Binding Protein NELFE and MYC Signaling in Hepatocellular Carcinoma.
Hien Dang, Atsushi Takai, Marshonna Forgues, Yotsowat Pomyen, Haiwei Mou, Quaid D Morris

Cancer Cell· July 2017

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RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins.
Debashish Ray, Kevin C H Ha, Kate Nie, Hong Zheng, Timothy R Hughes, Quaid D Morris

Methods· April 2017

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ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles.
Catalina V Anghel, Gerald Quon, Syed Haider, Francis Nguyen, Amit G Deshwar, Quaid D Morris

BMC Bioinformatics· May 2015

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High-throughput characterization of protein-RNA interactions.
Kate B Cook, Timothy R Hughes, Quaid D Morris

Brief Funct Genomics· January 2015

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