Publications by authors named "Katrina Button-Simons"

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A genetic cross reveals the contributions of and to piperaquine drug resistance.
John Kane, Xue Li, Sudhir Kumar, Katrina A Button-Simons, Katelyn M Vendrely Brenneman

mBio· July 2024

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Enhancing Gene Co-Expression Network Inference for the Malaria Parasite .
Qi Li, Katrina A Button-Simons, Mackenzie A C Sievert, Elias Chahoud, Gabriel F Foster

Genes (Basel)· May 2024

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A genetic cross reveals the contributions of and to piperaquine drug resistance.
John Kane, Xue Li, Sudhir Kumar, Katrina A Button-Simons, Katelyn M Vendrely Brenneman

bioRxiv· September 2023

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Chloroquine resistance evolution in Plasmodium falciparum is mediated by the putative amino acid transporter AAT1.
Alfred Amambua-Ngwa, Katrina A Button-Simons, Xue Li, Sudhir Kumar, Katelyn Vendrely Brenneman

Nat Microbiol· July 2023

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Sources of transcription variation in Plasmodium falciparum.
Lindsey B Turnbull, Katrina A Button-Simons, Nestor Agbayani, Michael T Ferdig

J Genet Genomics· October 2022

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A Malaria Parasite Cross Reveals Genetic Determinants of Growth in Different Culture Media.
Sudhir Kumar, Xue Li, Marina McDew-White, Ann Reyes, Elizabeth Delgado, Katrina A Button-Simons

Front Cell Infect Microbiol· June 2022

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Optimizing bulk segregant analysis of drug resistance using genetic crosses conducted in humanized mice.
Katelyn Vendrely Brenneman, Xue Li, Sudhir Kumar, Elizabeth Delgado, Lisa A Checkley, Katrina A Button-Simons

iScience· April 2022

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Cyclical regression covariates remove the major confounding effect of cyclical developmental gene expression with strain-specific drug response in the malaria parasite Plasmodium falciparum.
Gabriel J Foster, Mackenzie A C Sievert, Katrina Button-Simons, Katelyn M Vendrely, Jeanne Romero-Severson

BMC Genomics· March 2022

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The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite.
Min Zhang, Chengqi Wang, Jenna Oberstaller, Phaedra Thomas, Thomas D Otto, Katrina Button-Simons

Nat Commun· July 2021

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The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice.
Katrina A Button-Simons, Sudhir Kumar, Nelly Carmago, Meseret T Haile, Catherine Jett

Commun Biol· June 2021

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The extended recovery ring-stage survival assay provides a superior association with patient clearance half-life and increases throughput.
Sage Z Davis, Puspendra P Singh, Katelyn M Vendrely, Douglas A Shoue, Lisa A Checkley, Katrina A Button-Simons

Malar J· January 2020

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Leveraging crowdsourcing to accelerate global health solutions.
Sage Davis, Katrina Button-Simons, Taoufik Bensellak, Eren Mehmet Ahsen, Lisa Checkley

Nat Biotechnol· August 2019

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Altered expression of K13 disrupts DNA replication and repair in Plasmodium falciparum.
Justin Gibbons, Katrina A Button-Simons, Swamy R Adapa, Suzanne Li, Maxwell Pietsch

BMC Genomics· November 2018

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Hackathons as a means of accelerating scientific discoveries and knowledge transfer.
Amel Ghouila, Geoffrey Henry Siwo, Jean-Baka Domelevo Entfellner, Sumir Panji, Katrina A Button-Simons

Genome Res· May 2018

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Simultaneous genome-wide gene expression and transcript isoform profiling in the human malaria parasite.
Lindsey B Turnbull, Geoffrey H Siwo, Katrina A Button-Simons, Asako Tan, Lisa A Checkley

PLoS One· November 2017

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An integrative analysis of small molecule transcriptional responses in the human malaria parasite Plasmodium falciparum.
Geoffrey H Siwo, Roger S Smith, Asako Tan, Katrina A Button-Simons, Lisa A Checkley

BMC Genomics· December 2015

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Chemogenomic profiling of Plasmodium falciparum as a tool to aid antimalarial drug discovery.
Anupam Pradhan, Geoffrey H Siwo, Naresh Singh, Brian Martens, Bharath Balu, Katrina A Button-Simons

Sci Rep· November 2015

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Predicting functional and regulatory divergence of a drug resistance transporter gene in the human malaria parasite.
Geoffrey H Siwo, Asako Tan, Katrina A Button-Simons, Upeka Samarakoon, Lisa A Checkley

BMC Genomics· February 2015

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