Publications by authors named "Kelly Karch"

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Native Mass Spectrometry: Recent Progress and Remaining Challenges.
Kelly R Karch, Dalton T Snyder, Sophie R Harvey, Vicki H Wysocki

Annu Rev Biophys· May 2022

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the Understanding of ACD Toxicity with the Discovery of Cyclic Forms of Actin Oligomers.
Harper Smith, Nick Pinkerton, David B Heisler, Elena Kudryashova, Aaron R Hall, Kelly R Karch

Int J Mol Sci· January 2021

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Regulation of nuclear epigenome by mitochondrial DNA heteroplasmy.
Piotr K Kopinski, Kevin A Janssen, Patrick M Schaefer, Sophie Trefely, Caroline E Perry, Kelly R Karch

Proc Natl Acad Sci U S A· August 2019

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Hydrogen-Deuterium Exchange Coupled to Top- and Middle-Down Mass Spectrometry Reveals Histone Tail Dynamics before and after Nucleosome Assembly.
Kelly R Karch, Mariel Coradin, Levani Zandarashvili, Zhong-Yuan Kan, Morgan Gerace

Structure· December 2018

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Capturing the Onset of PRC2-Mediated Repressive Domain Formation.
Ozgur Oksuz, Varun Narendra, Chul-Hwan Lee, Nicolas Descostes, Gary LeRoy, Kelly Karch

Mol Cell· June 2018

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The nucleosomal surface is the main target of histone ADP-ribosylation in response to DNA damage.
Kelly R Karch, Marie-France Langelier, John M Pascal, Benjamin A Garcia

Mol Biosyst· November 2017

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Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code.
Simone Sidoli, Congcong Lu, Mariel Coradin, Xiaoshi Wang, Kelly R Karch

Epigenetics Chromatin· July 2017

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Monitoring proteolytic processing events by quantitative mass spectrometry.
Mariel Coradin, Kelly R Karch, Benjamin A Garcia

Expert Rev Proteomics· May 2017

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Rapid proteomic responses to a near-lethal heat stress in the salt marsh mussel Geukensia demissa.
Peter A Fields, Elizabeth M Burmester, Kelly M Cox, Kelly R Karch

J Exp Biol· September 2016

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A Novel Quantitative Mass Spectrometry Platform for Determining Protein O-GlcNAcylation Dynamics.
Xiaoshi Wang, Zuo-Fei Yuan, Jing Fan, Kelly R Karch, Lauren E Ball

Mol Cell Proteomics· July 2016

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Complete Workflow for Analysis of Histone Post-translational Modifications Using Bottom-up Mass Spectrometry: From Histone Extraction to Data Analysis.
Simone Sidoli, Natarajan V Bhanu, Kelly R Karch, Xiaoshi Wang, Benjamin A Garcia

J Vis Exp· May 2016

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Analyses of Histone Proteoforms Using Front-end Electron Transfer Dissociation-enabled Orbitrap Instruments.
Lissa C Anderson, Kelly R Karch, Scott A Ugrin, Mariel Coradin, A Michelle English

Mol Cell Proteomics· March 2016

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PARP-1 Activation Requires Local Unfolding of an Autoinhibitory Domain.
Jennine M Dawicki-McKenna, Marie-France Langelier, Jamie E DeNizio, Amanda A Riccio, Connie D Cao, Kelly R Karch

Mol Cell· December 2015

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Permuting the PGF Signature Motif Blocks both Archaeosortase-Dependent C-Terminal Cleavage and Prenyl Lipid Attachment for the Haloferax volcanii S-Layer Glycoprotein.
Mohd Farid Abdul Halim, Kelly R Karch, Yitian Zhou, Daniel H Haft, Benjamin A Garcia

J Bacteriol· December 2015

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Low Resolution Data-Independent Acquisition in an LTQ-Orbitrap Allows for Simplified and Fully Untargeted Analysis of Histone Modifications.
Simone Sidoli, Johayra Simithy, Kelly R Karch, Katarzyna Kulej, Benjamin A Garcia

Anal Chem· November 2015

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Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications.
Simone Sidoli, Shu Lin, Lei Xiong, Natarajan V Bhanu, Kelly R Karch

Mol Cell Proteomics· September 2015

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Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis.
Simone Sidoli, Zuo-Fei Yuan, Shu Lin, Kelly Karch, Xiaoshi Wang

Proteomics· May 2015

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Bottom-up and middle-down proteomics have comparable accuracies in defining histone post-translational modification relative abundance and stoichiometry.
Simone Sidoli, Shu Lin, Kelly R Karch, Benjamin A Garcia

Anal Chem· March 2015

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High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications.
Kelly R Karch, Barry M Zee, Benjamin A Garcia

J Proteome Res· December 2014

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Identification and interrogation of combinatorial histone modifications.
Kelly R Karch, Jamie E Denizio, Ben E Black, Benjamin A Garcia

Front Genet· December 2013

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Latitudinal variation in protein expression after heat stress in the salt marsh mussel Geukensia demissa.
Peter A Fields, Kelly M Cox, Kelly R Karch

Integr Comp Biol· November 2012

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