Publications by authors named "Kenneth D Stuart"

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ADTnorm: robust integration of single-cell protein measurement across CITE-seq datasets.
Ye Zheng, Daniel P Caron, Ju Yeong Kim, Seong-Hwan Jun, Yuan Tian, Kenneth D Stuart

Nat Commun· July 2025

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tagtango: an application to compare single-cell annotations.
Bernat Bramon Mora, Helen Lindsay, Antonin Thiébaut, Kenneth D Stuart, Raphael Gottardo

Bioinformatics· February 2025

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ADTnorm: Robust Integration of Single-cell Protein Measurement across CITE-seq Datasets.
Ye Zheng, Daniel P Caron, Ju Yeong Kim, Seong-Hwan Jun, Yuan Tian, Kenneth D Stuart

Res Sq· July 2024

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Deep mutational scanning of the RNase III-like domain in RNA editing protein KREPB4.
Suzanne M McDermott, Vy Pham, Brian Oliver, Jason Carnes, D Noah Sather, Kenneth D Stuart

Front Cell Infect Microbiol· April 2024

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Multiple domains of the integral KREPA3 protein are critical for the structure and precise functions of RNA editing catalytic complexes in .
Brittney Davidge, Suzanne M McDermott, Jason Carnes, Isaac Lewis, Maxwell Tracy, Kenneth D Stuart

RNA· October 2023

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Distinct immune responses associated with vaccination status and protection outcomes after malaria challenge.
Damian A Oyong, Fergal J Duffy, Maxwell L Neal, Ying Du, Jason Carnes, Kenneth D Stuart

PLoS Pathog· May 2023

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Multiple domains of the integral KREPA3 protein are critical for the structure and precise functions of RNA Editing Catalytic Complexes in .
Brittney Davidge, Suzanne M McDermott, Jason Carnes, Isaac Lewis, Maxwell Tracy, Kenneth D Stuart

bioRxiv· April 2023

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Evidence for the heterologous benefits of prior BCG vaccination on COVISHIELD™ vaccine-induced immune responses in SARS-CoV-2 seronegative young Indian adults.
Srabanti Rakshit, Vasista Adiga, Asma Ahmed, Chaitra Parthiban, Nirutha Chetan Kumar, Kenneth D Stuart

Front Immunol· October 2022

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BCG revaccination qualitatively and quantitatively enhances SARS-CoV-2 spike-specific neutralizing antibody and T cell responses induced by the COVISHIELD vaccine in SARS-CoV-2 seronegative young Indian adults.
Srabanti Rakshit, Vasista Adiga, Asma Ahmed, Chaitra Parthiban, Nirutha Chetan Kumar, Kenneth D Stuart

Res Sq· March 2022

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Systems analysis of immune responses to attenuated P. falciparum malaria sporozoite vaccination reveals excessive inflammatory signatures correlating with impaired immunity.
Ying Du, Nina Hertoghs, Fergal J Duffy, Jason Carnes, Suzanne M McDermott, Kenneth D Stuart

PLoS Pathog· February 2022

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Preimmunization correlates of protection shared across malaria vaccine trials in adults.
Maxwell L Neal, Fergal J Duffy, Ying Du, John D Aitchison, Kenneth D Stuart

NPJ Vaccines· January 2022

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OMIP-064: A 27-Color Flow Cytometry Panel to Detect and Characterize Human NK Cells and Other Innate Lymphoid Cell Subsets, MAIT Cells, and γδ T Cells.
Nina Hertoghs, Katharine V Schwedhelm, Kenneth D Stuart, Margaret Juliana McElrath, Stephen C De Rosa

Cytometry A· October 2020

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BCG revaccination boosts adaptive polyfunctional Th1/Th17 and innate effectors in IGRA+ and IGRA- Indian adults.
Srabanti Rakshit, Asma Ahmed, Vasista Adiga, Bharath K Sundararaj, Pravat Nalini Sahoo, Kenneth D Stuart

JCI Insight· December 2019

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Controlled Human Malaria Infection Leads to Long-Lasting Changes in Innate and Innate-like Lymphocyte Populations.
Maxmillian Mpina, Nicholas J Maurice, Masanao Yajima, Chloe K Slichter, Hannah W Miller, Kenneth D Stuart

J Immunol· July 2017

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Protein complex directs hemoglobin-to-hemozoin formation in Plasmodium falciparum.
Monika Chugh, Vidhya Sundararaman, Saravanan Kumar, Vanga S Reddy, Waseem A Siddiqui, Kenneth D Stuart

Proc Natl Acad Sci U S A· April 2013

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Paromomycin affects translation and vesicle-mediated trafficking as revealed by proteomics of paromomycin -susceptible -resistant Leishmania donovani.
Bhavna Chawla, Anupam Jhingran, Aswini Panigrahi, Kenneth D Stuart, Rentala Madhubala

PLoS One· March 2012

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Trypanosoma brucei mitochondrial respiratome: composition and organization in procyclic form.
Nathalie Acestor, Alena Zíková, Rachel A Dalley, Atashi Anupama, Aswini K Panigrahi, Kenneth D Stuart

Mol Cell Proteomics· September 2011

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Identity crisis? The need for systematic gene IDs.
Marilyn Parsons, Peter J Myler, Matthew Berriman, David S Roos, Kenneth D Stuart

Trends Parasitol· May 2011

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The Fe/S cluster assembly protein Isd11 is essential for tRNA thiolation in Trypanosoma brucei.
Zdenek Paris, Piya Changmai, Mary Anne T Rubio, Alena Zíková, Kenneth D Stuart

J Biol Chem· July 2010

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A protein-protein interaction map of trypanosome ~20S editosomes.
Achim Schnaufer, Meiting Wu, Young-jun Park, Tadashi Nakai, Junpeng Deng, Kenneth D Stuart

J Biol Chem· February 2010

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Functions and cellular localization of cysteine desulfurase and selenocysteine lyase in Trypanosoma brucei.
Pavel Poliak, Douglas Van Hoewyk, Miroslav Oborník, Alena Zíková, Kenneth D Stuart

FEBS J· January 2010

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The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei.
Xuemin Guo, Nancy Lewis Ernst, Jason Carnes, Kenneth D Stuart

PLoS One· January 2010

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Protein composition of Trypanosoma brucei mitochondrial membranes.
Nathalie Acestor, Aswini K Panigrahi, Yuko Ogata, Atashi Anupama, Kenneth D Stuart

Proteomics· December 2009

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The F(0)F(1)-ATP synthase complex contains novel subunits and is essential for procyclic Trypanosoma brucei.
Alena Zíková, Achim Schnaufer, Rachel A Dalley, Aswini K Panigrahi, Kenneth D Stuart

PLoS Pathog· May 2009

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A comprehensive analysis of Trypanosoma brucei mitochondrial proteome.
Aswini K Panigrahi, Yuko Ogata, Alena Zíková, Atashi Anupama, Rachel A Dalley, Kenneth D Stuart

Proteomics· January 2009

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