Publications by authors named "Koki Horikoshi"

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A high-molecular-weight, alkaline, and thermostable β-1,4-xylanase of a subseafloor Microcella alkaliphila.
Koki Kuramochi, Kohsuke Uchimura, Atsushi Kurata, Tohru Kobayashi, Yuu Hirose, Koki Horikoshi

Extremophiles· July 2016

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Nar is the dominant dissimilatory nitrate reductase under high pressure conditions in the deep-sea denitrifier Pseudomonas sp. MT-1.
Yuji Oikawa, Yui Sinmura, Hikari Ishizaka, Ryota Midorikawa, Jun Kawamoto, Koki Horikoshi

J Gen Appl Microbiol· July 2015

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In situ microscopic observation of chitin and fungal cells with chitinous cell walls in hydrothermal conditions.
Shigeru Deguchi, Kaoru Tsujii, Koki Horikoshi

Sci Rep· July 2015

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A pectate lyase from a deep subseafloor Georgenia muralis with unusual molecular characteristics.
Masato Sasaki, Osamu Koide, Tohru Kobayashi, Ron Usami, Koki Horikoshi

Extremophiles· January 2015

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Genome Sequence of the Deep-Sea Denitrifier Pseudomonas sp. Strain MT-1, Isolated from the Mariana Trench.
Shun Fujinami, Yuji Oikawa, Takuma Araki, Yui Shinmura, Ryota Midorikawa, Koki Horikoshi

Genome Announc· December 2014

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Highly thermostable and surfactant-activated chitinase from a subseafloor bacterium, Laceyella putida.
Hiroki Shibasaki, Kohsuke Uchimura, Takeshi Miura, Tohru Kobayashi, Ron Usami, Koki Horikoshi

Appl Microbiol Biotechnol· September 2014

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Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria.
Barbara Klippel, Kerstin Sahm, Alexander Basner, Sigrid Wiebusch, Patrick John, Koki Horikoshi

Extremophiles· September 2014

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Povalibacter uvarum gen. nov., sp. nov., a polyvinyl-alcohol-degrading bacterium isolated from grapes.
Yuichi Nogi, Masaki Yoshizumi, Koei Hamana, Masayuki Miyazaki, Koki Horikoshi

Int J Syst Evol Microbiol· August 2014

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Genetic and biochemical characterization of the Pseudoalteromonas tetraodonis alkaline κ-carrageenase.
Tohru Kobayashi, Kohsuke Uchimura, Osamu Koide, Shigeru Deguchi, Koki Horikoshi

Biosci Biotechnol Biochem· July 2012

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Cloning and sequencing of inulinase and β-fructofuranosidase genes of a deep-sea Microbulbifer species and properties of recombinant enzymes.
Tohru Kobayashi, Kohsuke Uchimura, Shigeru Deguchi, Koki Horikoshi

Appl Environ Microbiol· April 2012

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Salarchaeum japonicum gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea isolated from commercial salt.
Yasuhiro Shimane, Yuji Hatada, Hiroaki Minegishi, Akinobu Echigo, Syuhei Nagaoka, Koki Horikoshi

Int J Syst Evol Microbiol· September 2011

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Characterization of chitosanase of a deep biosphere Bacillus strain.
Tohru Kobayashi, Osamu Koide, Shigeru Deguchi, Koki Horikoshi

Biosci Biotechnol Biochem· September 2011

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Complete genome sequence of the marine cellulose- and xylan-degrading bacterium Glaciecola sp. strain 4H-3-7+YE-5.
Barbara Klippel, Adriane Lochner, David C Bruce, Karen Walston Davenport, Chris Detter, Koki Horikoshi

J Bacteriol· September 2011

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Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae.
Barbara Klippel, Adriane Lochner, David C Bruce, Karen Walston Davenport, Chris Detter, Koki Horikoshi

J Bacteriol· September 2011

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Microbial growth at hyperaccelerations up to 403,627 x g.
Shigeru Deguchi, Hirokazu Shimoshige, Mikiko Tsudome, Sada-atsu Mukai, Robert W Corkery, Koki Horikoshi

Proc Natl Acad Sci U S A· May 2011

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Natronoarchaeum mannanilyticum gen. nov., sp. nov., an aerobic, extremely halophilic archaeon isolated from commercial salt.
Yasuhiro Shimane, Yuji Hatada, Hiroaki Minegishi, Toru Mizuki, Akinobu Echigo, Koki Horikoshi

Int J Syst Evol Microbiol· November 2010

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Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme.
Kohsuke Uchimura, Masayuki Miyazaki, Yuichi Nogi, Tohru Kobayashi, Koki Horikoshi

Mar Biotechnol (NY)· October 2010

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Molecular characterization of inorganic sulfur-compound metabolism in the deep-sea epsilonproteobacterium Sulfurovum sp. NBC37-1.
Masahiro Yamamoto, Satoshi Nakagawa, Shigeru Shimamura, Ken Takai, Koki Horikoshi

Environ Microbiol· May 2010

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Dermacozines, a new phenazine family from deep-sea dermacocci isolated from a Mariana Trench sediment.
Wael M Abdel-Mageed, Bruce F Milne, Marcell Wagner, Marc Schumacher, Peter Sandor, Koki Horikoshi

Org Biomol Chem· May 2010

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Collagenolytic subtilisin-like protease from the deep-sea bacterium Alkalimonas collagenimarina AC40T.
Atsushi Kurata, Kohsuke Uchimura, Tohru Kobayashi, Koki Horikoshi

Appl Microbiol Biotechnol· March 2010

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Development of 16S rRNA gene-targeted primers for detection of archaeal anaerobic methanotrophs (ANMEs).
Ai Miyashita, Hanako Mochimaru, Hiromi Kazama, Akiyoshi Ohashi, Takashi Yamaguchi, Koki Horikoshi

FEMS Microbiol Lett· August 2009

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Versatile solidified nanofibrous cellulose-containing media for growth of extremophiles.
Mikiko Tsudome, Shigeru Deguchi, Kaoru Tsujii, Susumu Ito, Koki Horikoshi

Appl Environ Microbiol· July 2009

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Physiological roles of two dissimilatory nitrate reductases in the deep-sea denitrifier Pseudomonas sp. strain MT-1.
Eriko Ikeda, Satomi Andou, Ubu Iwama, Chiaki Kato, Koki Horikoshi

Biosci Biotechnol Biochem· April 2009

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Identification and characterization of two alternative sigma factors of RNA polymerase in the deep-sea piezophilic bacterium Shewanella violacea, strain DSS12.
Hiroaki Kawano, Hiroyuki Takahashi, Fumiyoshi Abe, Chiaki Kato, Koki Horikoshi

Biosci Biotechnol Biochem· January 2009

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Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan.
Masayuki Miyazaki, Yuichi Nogi, Yoshihiro Fujiwara, Masaru Kawato, Takahiko Nagahama, Koki Horikoshi

Int J Syst Evol Microbiol· December 2008

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