Publications by authors named "Kosuke Morikawa"

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Adjusting for publication bias in meta-analysis via inverse probability weighting using clinical trial registries.
Ao Huang, Kosuke Morikawa, Tim Friede, Satoshi Hattori

Biometrics· September 2023

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Metal-binding and folding thermodynamics of Escherichia coli ribonuclease HI related to its catalytic function.
Yumi Kitagawa, Zengwei Liao, Kosuke Morikawa, Masayuki Oda

Biophys Chem· April 2023

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Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Zengwei Liao, Takuji Oyama, Yumi Kitagawa, Katsuo Katayanagi, Kosuke Morikawa

Acta Crystallogr D Struct Biol· March 2022

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Identification of the ternary complex of ribonuclease HI:RNA/DNA hybrid:metal ions by ESI mass spectrometry.
Tomoshige Ando, Nujarin Jongruja, Nobuaki Okumura, Kosuke Morikawa, Shigenori Kanaya

J Biol Chem· August 2021

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G20 Summit and emergency medical services in Osaka, Japan.
Kenta Tanaka, Kosuke Morikawa, Yusuke Katayama, Tetsuhisa Kitamura, Tomotaka Sobue

Acute Med Surg· May 2021

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Partial Replacement of Nucleosomal DNA with Human FACT Induces Dynamic Exposure and Acetylation of Histone H3 N-Terminal Tails.
Yasuo Tsunaka, Hideaki Ohtomo, Kosuke Morikawa, Yoshifumi Nishimura

iScience· October 2020

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Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy.
Kouta Mayanagi, Keisuke Oki, Naoyuki Miyazaki, Sonoko Ishino, Takeshi Yamagami, Kosuke Morikawa

BMC Biol· October 2020

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Structural visualization of key steps in nucleosome reorganization by human FACT.
Kouta Mayanagi, Kazumi Saikusa, Naoyuki Miyazaki, Satoko Akashi, Kenji Iwasaki, Kosuke Morikawa

Sci Rep· July 2019

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Full Moon and Out-of-Hospital Cardiac Arrest in Japan　- Population-Based, Double-Controlled Case Series Analysis.
Junya Sado, Kosuke Morikawa, Satoshi Hattori, Kosuke Kiyohara, Tasuku Matsuyama

Circ Rep· May 2019

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Direct visualization of DNA baton pass between replication factors bound to PCNA.
Kouta Mayanagi, Sonoko Ishino, Tsuyoshi Shirai, Takuji Oyama, Shinichi Kiyonari, Kosuke Morikawa

Sci Rep· November 2018

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A Dual Base Flipping Mechanism for Archaeal Mismatch Repair.
Mariko Ariyoshi, Kosuke Morikawa

Structure· November 2016

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Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Yasuo Tsunaka, Yoshie Fujiwara, Takuji Oyama, Susumu Hirose, Kosuke Morikawa

Genes Dev· March 2016

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Mutational and structural analyses of Caldanaerobius polysaccharolyticus Man5B reveal novel active site residues for family 5 glycoside hydrolases.
Takuji Oyama, George E Schmitz, Dylan Dodd, Yejun Han, Alanna Burnett, Kosuke Morikawa

PLoS One· September 2014

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[Transcriptional machinery sensing cellular metabolism: nuclear receptor, PPARgamma, mediates crosstalk between metabolic networks].
Takuma Shiraki, Tsuyoshi Waku, Kosuke Morikawa

Seikagaku· September 2013

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Phosphorylation-coupled intramolecular dynamics of unstructured regions in chromatin remodeler FACT.
Manami Hashimoto, Noriyuki Kodera, Yasuo Tsunaka, Masayuki Oda, Mitsuru Tanimoto, Kosuke Morikawa

Biophys J· May 2013

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Design and synthesis of a series of α-benzyl phenylpropanoic acid-type peroxisome proliferator-activated receptor (PPAR) gamma partial agonists with improved aqueous solubility.
Masao Ohashi, Takuji Oyama, Endy Widya Putranto, Tsuyoshi Waku, Hiromi Nobusada, Kosuke Morikawa

Bioorg Med Chem· April 2013

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Structure-based mutational study of an archaeal DNA ligase towards improvement of ligation activity.
Maiko Tanabe, Sonoko Ishino, Masafumi Yohda, Kosuke Morikawa, Yoshizumi Ishino

Chembiochem· November 2012

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Bidirectional fluorescence properties of pyrene-based peroxisome proliferator-activated receptor (PPAR) α/δ dual agonist.
Shintaro Ban, Takuji Oyama, Jun-ichi Kasuga, Kenji Ohgane, Yoshino Nishio, Kosuke Morikawa

Bioorg Med Chem· June 2012

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CENP-T-W-S-X forms a unique centromeric chromatin structure with a histone-like fold.
Tatsuya Nishino, Kozo Takeuchi, Karen E Gascoigne, Aussie Suzuki, Tetsuya Hori, Kosuke Morikawa

Cell· February 2012

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Detecting structural similarity of ligand interactions in the lipid metabolic system including enzymes, lipid-binding proteins and nuclear receptors.
Clara Shionyu-Mitsuyama, Tsuyoshi Waku, Takuma Shiraki, Takuji Oyama, Tsuyoshi Shirai, Kosuke Morikawa

Protein Eng Des Sel· April 2011

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Spindle microtubules generate tension-dependent changes in the distribution of inner kinetochore proteins.
Aussie Suzuki, Tetsuya Hori, Tatsuya Nishino, Jiro Usukura, Atsushi Miyagi, Kosuke Morikawa

J Cell Biol· April 2011

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Architectures of archaeal GINS complexes, essential DNA replication initiation factors.
Takuji Oyama, Sonoko Ishino, Seiji Fujino, Hiromi Ogino, Tsuyoshi Shirai, Kosuke Morikawa

BMC Biol· April 2011

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Architecture of the DNA polymerase B-proliferating cell nuclear antigen (PCNA)-DNA ternary complex.
Kouta Mayanagi, Shinichi Kiyonari, Hirokazu Nishida, Mihoko Saito, Daisuke Kohda, Kosuke Morikawa

Proc Natl Acad Sci U S A· February 2011

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Design, synthesis, and structural analysis of phenylpropanoic acid-type PPARγ-selective agonists: discovery of reversed stereochemistry-activity relationship.
Masao Ohashi, Takuji Oyama, Izumi Nakagome, Mayumi Satoh, Yoshino Nishio, Kosuke Morikawa

J Med Chem· January 2011

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The nuclear receptor PPARγ individually responds to serotonin- and fatty acid-metabolites.
Tsuyoshi Waku, Takuma Shiraki, Takuji Oyama, Kanako Maebara, Rinna Nakamori, Kosuke Morikawa

EMBO J· October 2010

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