Publications by authors named "Kristen Knipe"

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Transmission potential of vaccinated and unvaccinated persons infected with the SARS-CoV-2 Delta variant in a federal prison, July-August 2021.
Phillip P Salvatore, Christine C Lee, Sadia Sleweon, David W McCormick, Lavinia Nicolae, Kristen Knipe

Vaccine· March 2023

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Benchmark datasets for SARS-CoV-2 surveillance bioinformatics.
Lingzi Xiaoli, Jill V Hagey, Daniel J Park, Christopher A Gulvik, Erin L Young, Kristen Knipe

PeerJ· January 2023

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Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Anastasia S Lambrou, Philip Shirk, Molly K Steele, Prabasaj Paul, Clinton R Paden, Kristen Knipe

MMWR Morb Mortal Wkly Rep· February 2022

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Performance Characteristics of the Abbott BinaxNOW SARS-CoV-2 Antigen Test in Comparison to Real-Time Reverse Transcriptase PCR and Viral Culture in Community Testing Sites during November 2020.
Olivia Almendares, Jessica L Prince-Guerra, Leisha D Nolen, Jayleen K L Gunn, Ariella P Dale, Kristen Knipe

J Clin Microbiol· January 2022

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Evaluation of Abbott BinaxNOW Rapid Antigen Test for SARS-CoV-2 Infection at Two Community-Based Testing Sites - Pima County, Arizona, November 3-17, 2020.
Jessica L Prince-Guerra, Olivia Almendares, Leisha D Nolen, Jayleen K L Gunn, Ariella P Dale, Kristen Knipe

MMWR Morb Mortal Wkly Rep· January 2021

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Conserved Patterns of Symmetric Inversion in the Genome Evolution of Respiratory Pathogens.
Michael R Weigand, Yanhui Peng, Dhwani Batra, Mark Burroughs, Jamie K Davis, Kristen Knipe

mSystems· November 2019

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Conjugal Transfer, Whole-Genome Sequencing, and Plasmid Analysis of Four -Bearing Isolates from U.S. Patients.
Wenming Zhu, Adrian Lawsin, Rebecca L Lindsey, Dhwani Batra, Kristen Knipe

Antimicrob Agents Chemother· April 2019

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Screening and Genomic Characterization of Filamentous Hemagglutinin-Deficient Bordetella pertussis.
Michael R Weigand, Lucia C Pawloski, Yanhui Peng, Hong Ju, Mark Burroughs, Kristen Knipe

Infect Immun· April 2018

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Distinct evolutionary patterns of Neisseria meningitidis serogroup B disease outbreaks at two universities in the USA.
Li Hao, Matthew T G Holden, Xin Wang, Lubomira Andrew, Sabine Wellnitz, Kristen Knipe

Microb Genom· April 2018

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High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing.
Justin Kim, Rebecca L Lindsey, Lisley Garcia-Toledo, Vladimir N Loparev, Lori A Rowe, Kristen Knipe

Genome Announc· April 2018

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High-Quality Complete and Draft Genome Sequences for Three spp. and Three spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping.
Max R Schroeder, Phalasy Juieng, Dhwani Batra, Kristen Knipe, Lori A Rowe

Genome Announc· January 2018

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High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Strains Generated with PacBio Sequencing.
Peyton Smith, Rebecca L Lindsey, Lori A Rowe, Dhwani Batra, Devon Stripling, Kristen Knipe

Genome Announc· January 2018

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The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement.
Michael R Weigand, Yanhui Peng, Vladimir Loparev, Dhwani Batra, Katherine E Bowden, Kristen Knipe

J Bacteriol· April 2017

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High-Quality Genome Sequence of an O157 Strain Carrying an Resistance Gene Isolated from a Patient in the United States.
Rebecca L Lindsey, Dhwani Batra, Lori Rowe, Vladimir N Loparev, Devon Stripling, Kristen Knipe

Genome Announc· March 2017

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Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67).
Julia V Bugrysheva, Blake Cherney, David Sue, Andrew B Conley, Lori A Rowe, Kristen M Knipe

Genome Announc· November 2016

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The Establishment and Diversification of Epidemic-Associated Serogroup W Meningococcus in the African Meningitis Belt, 1994 to 2012.
Adam C Retchless, Fang Hu, Abdoul-Salam Ouédraogo, Seydou Diarra, Kristen Knipe

mSphere· November 2016

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Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics.
Katherine E Bowden, Michael R Weigand, Yanhui Peng, Pamela K Cassiday, Scott Sammons, Kristen Knipe

mSphere· June 2016

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Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak.
Ainsley C Nicholson, Anne M Whitney, Brian D Emery, Melissa E Bell, Jarrett T Gartin, Kristen Knipe

Genome Announc· June 2016

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High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps.
Rebecca L Lindsey, Lori Rowe, Lisley Garcia-Toledo, Vladimir Loparev, Kristen Knipe

Genome Announc· June 2016

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Finished Annotated Genome Sequence of Burkholderia pseudomallei Strain Bp1651, a Multidrug-Resistant Clinical Isolate.
Julia V Bugrysheva, David Sue, Janetta Hakovirta, Vladimir N Loparev, Kristen Knipe

Genome Announc· December 2015

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Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25.
Rebecca L Lindsey, Kristen Knipe, Lori Rowe, Lisley Garcia-Toledo, Vladimir Loparev

Genome Announc· December 2015

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Multidrug-resistant IncA/C plasmid in Vibrio cholerae from Haiti.
Jason P Folster, Lee Katz, Andre McCullough, Michele B Parsons, Kristen Knipe

Emerg Infect Dis· November 2014

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Genome Sequences of Vibrio navarrensis, a Potential Human Pathogen.
Lori M Gladney, Lee S Katz, Kristen M Knipe, Lori A Rowe, Andrew B Conley

Genome Announc· November 2014

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Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains.
Rebecca L Lindsey, Eija Trees, Scott Sammons, Vladimir Loparev, Mike Frace, Kristen Knipe

Genome Announc· July 2014

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vanG element insertions within a conserved chromosomal site conferring vancomycin resistance to Streptococcus agalactiae and Streptococcus anginosus.
Velusamy Srinivasan, Benjamin J Metcalf, Kristen M Knipe, Mahamoudou Ouattara, Lesley McGee

mBio· July 2014

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