Publications by authors named "Lin-Xing Chen"

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Bioleaching Microbial Community Metabolism and Composition Driven by Copper Sulphide Mineral Type.
Katherine R Lane, Sarah E Jones, Thomas H Osborne, David Geller-McGrath, Bennet C Nwaobi, LinXing Chen

Environ Microbiol Rep· December 2025

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Megaplasmids associate with and other .
Allison K Guitor, Shuai Wang, Owen T Tuck, Brian Firek, Nadja Mostacci, Lin-Xing Chen

bioRxiv· October 2025

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A prevalent huge phage clade in human and animal gut microbiomes.
LinXing Chen, Antonio Pedro Camargo, Yiting Qin, Eugene V Koonin, Haoyu Wang

bioRxiv· August 2025

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A prevalent huge phage clade in human and animal gut microbiomes.
LinXing Chen, Antonio Pedro Camargo, Yiting Qin, Eugene V Koonin, Haoyu Wang

Res Sq· August 2025

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Explainable machine learning model for predicting acute pancreatitis mortality in the intensive care unit.
Meng Jiang, Xiao-Peng Wu, Xing-Chen Lin, Chang-Li Li

BMC Gastroenterol· March 2025

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Early neurological wake-up test in intubated patients with traumatic brain injury.
Meng Jiang, Chang-Li Li, Xiao-Peng Wu, Xing-Chen Lin, Yuan-Run Zhu

Int J Emerg Med· March 2025

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Whole-genome sequencing identified ALK as a novel susceptible gene of Hirschsprung disease.
Meng Jiang, Chang-Li Li, Xing-Chen Lin, Mei Hong, Huan-Huan Li

Arab J Gastroenterol· February 2025

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Application of Online Multi-Internal Standard Calibration for Determination of Iodine by ICP-MS.
Long-Hua Zhou, Xing-Chen Lin, Li-Li Suo, Li-Fang Ma, Gui-Xiang Hu

J Mass Spectrom· January 2025

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Methanotrophic Methanoperedens archaea host diverse and interacting extrachromosomal elements.
Ling-Dong Shi, Jacob West-Roberts, Marie C Schoelmerich, Petar I Penev, LinXing Chen

Nat Microbiol· September 2024

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pH and thiosulfate dependent microbial sulfur oxidation strategies across diverse environments.
Lauren E Twible, Kelly Whaley-Martin, Lin-Xing Chen, Tara Colenbrander Nelson, James L S Arrey

Front Microbiol· July 2024

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Identifying novel acute pancreatitis sub-phenotypes using total serum calcium trajectories.
Chang-Li Li, Xing-Chen Lin, Meng Jiang

BMC Gastroenterol· April 2024

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Early warning system enables accurate mortality risk prediction for acute gastrointestinal bleeding admitted to intensive care unit.
Meng Jiang, Chang-Li Li, Xing-Chen Lin, Li-Gang Xu

Intern Emerg Med· March 2024

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COBRA improves the completeness and contiguity of viral genomes assembled from metagenomes.
LinXing Chen, Jillian F Banfield

Nat Microbiol· March 2024

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The Global and Regional Prevalence of Hospital-Acquired Carbapenem-Resistant Infection: A Systematic Review and Meta-analysis.
Xing-Chen Lin, Chang-Li Li, Shao-Yang Zhang, Xiao-Feng Yang, Meng Jiang

Open Forum Infect Dis· February 2024

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CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes.
Benjamin A Adler, Marena I Trinidad, Daniel Bellieny-Rabelo, Elaine Zhang, Hannah M Karp, LinXing Chen, Chenglong Xia

Nucleic Acids Res· January 2024

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Infant gut DNA bacteriophage strain persistence during the first 3 years of life.
Yue Clare Lou, LinXing Chen, Adair L Borges, Jacob West-Roberts, Brian A Firek

Cell Host Microbe· January 2024

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Eukaryotic RNA-guided endonucleases evolved from a unique clade of bacterial enzymes.
Peter H Yoon, Petr Skopintsev, Honglue Shi, LinXing Chen, Benjamin A Adler, Kai Chen

Nucleic Acids Res· December 2023

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Deep-branching evolutionary intermediates reveal structural origins of form I rubisco.
Albert K Liu, Benjamin Kaeser, LinXing Chen, Jacob West-Roberts, Leah J Taylor-Kearney

Curr Biol· December 2023

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Host translation machinery is not a barrier to phages that interact with both CPR and non-CPR bacteria.
Jett Liu, Alexander L Jaffe, LinXing Chen, Batbileg Bor, Jillian F Banfield

mBio· December 2023

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Eukaryotic RNA-guided endonucleases evolved from a unique clade of bacterial enzymes.
Peter H Yoon, Petr Skopintsev, Honglue Shi, Lin-Xing Chen, Benjamin A Adler, Kai Chen

bioRxiv· August 2023

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Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes.
Laura Eme, Daniel Tamarit, Eva F Caceres, Courtney W Stairs, Valerie De Anda, Lin-Xing Chen

Nature· June 2023

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O partitioning of sulfur oxidizing bacteria drives acidity and thiosulfate distributions in mining waters.
Kelly J Whaley-Martin, Lin-Xing Chen, Tara Colenbrander Nelson, Jennifer Gordon, Rose Kantor

Nat Commun· April 2023

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A novel glycosylation-related gene signature predicts survival in patients with lung adenocarcinoma.
Jin-Xiao Liang, Qian Chen, Wei Gao, Da Chen, Xin-Yu Qian, Xing-Chen Lin

BMC Bioinformatics· December 2022

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Long-Term Incubation of Lake Water Enables Genomic Sampling of Consortia Involving and Candidate Phyla Radiation Bacteria.
Alexander L Jaffe, Maxime Fuster, Marie C Schoelmerich, Lin-Xing Chen, Jonathan Colombet

mSystems· April 2022

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Phage-encoded ribosomal protein S21 expression is linked to late-stage phage replication.
Lin-Xing Chen, Alexander L Jaffe, Adair L Borges, Petar I Penev, Tara Colenbrander Nelson

ISME Commun· March 2022

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