Publications by authors named "Linlin Zhuo"

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ViruSeg: Harnessing the Power of Large Language-Image Model for Enhanced Virus Image Segmentation.
Shengxiang Wang, Xiangzheng Fu, Zhenya Du, Xinxin Liu, Qiaochu Mai, Linlin Zhuo

Interdiscip Sci· December 2025

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MicroEnvPPI: Microenvironment-Aware Optimization Enables Generalizable Protein-Protein Interaction Prediction.
Kun Yang, Yifan Chen, Yanshi Wei, Mingrong Xiang, Linlin Zhuo

J Chem Inf Model· November 2025

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Enhancing Herbal Medicine-Drug Interaction Prediction Using Large Language Models.
Sisi Yuan, Zhecheng Zhou, Xinyuan Jin, Linlin Zhuo, Keqin Li

IEEE J Biomed Health Inform· October 2025

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Multi-scale information fusion and decoupled representation learning for robust microbe-disease interaction prediction.
Wentao Wang, Qiaoying Yan, Qingquan Liao, Xinyuan Jin, Yinyin Gong, Linlin Zhuo

J Pharm Anal· August 2025

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GH-UNet: group-wise hybrid convolution-VIT for robust medical image segmentation.
Shengxiang Wang, Ge Li, Min Gao, Linlin Zhuo, Mingzhe Liu

NPJ Digit Med· July 2025

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A new approach for microbe-disease association prediction: incorporating representation learning of latent relationships.
Shaopeng Liu, Wanlu Hu, Chun-Chun Wang, Linlin Zhuo, Xu Lu

BMC Med Inform Decis Mak· July 2025

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DrugKANs: A Paradigm to Enhance Drug-Target Interaction Prediction With KANs.
Xiangzheng Fu, Zhenya Du, Yifan Chen, Haiting Chen, Linlin Zhuo

IEEE J Biomed Health Inform· May 2025

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MultiCTox: Empowering Accurate Cardiotoxicity Prediction through Adaptive Multimodal Learning.
Lin Feng, Xiangzheng Fu, Zhenya Du, Yuting Guo, Linlin Zhuo

J Chem Inf Model· April 2025

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AEGNN-M:A 3D Graph-Spatial Co-Representation Model for Molecular Property Prediction.
Lijun Cai, Yuling He, Xiangzheng Fu, Linlin Zhuo, Quan Zou

IEEE J Biomed Health Inform· March 2025

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CardiOT: Towards Interpretable Drug Cardiotoxicity Prediction Using Optimal Transport and Kolmogorov--Arnold Networks.
Xinyu Zhang, Hao Wang, Zhenya Du, Linlin Zhuo, Xiangzheng Fu

IEEE J Biomed Health Inform· March 2025

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AnomalGRN: deciphering single-cell gene regulation network with graph anomaly detection.
Zhecheng Zhou, Jinhang Wei, Mingzhe Liu, Linlin Zhuo, Xiangzheng Fu

BMC Biol· March 2025

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BloodPatrol: Revolutionizing Blood Cancer Diagnosis - Advanced Real-Time Detection Leveraging Deep Learning & Cloud Technologies.
Jinhang Wei, Longyue Wang, Zhecheng Zhou, Linlin Zhuo, Xiangxiang Zeng

IEEE J Biomed Health Inform· November 2024

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DrugReAlign: a multisource prompt framework for drug repurposing based on large language models.
Jinhang Wei, Linlin Zhuo, Xiangzheng Fu, XiangXiang Zeng, Li Wang

BMC Biol· October 2024

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MKAN-MMI: empowering traditional medicine-microbe interaction prediction with masked graph autoencoders and KANs.
Sheng Ye, Jue Wang, Mingmin Zhu, Sisi Yuan, Linlin Zhuo

Front Pharmacol· October 2024

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MultiCBlo: Enhancing predictions of compound-induced inhibition of cardiac ion channels with advanced multimodal learning.
Tao Wang, Zhenya Du, Linlin Zhuo, Xiangzheng Fu, Quan Zou

Int J Biol Macromol· September 2024

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Efficient Deep Model Ensemble Framework for Drug-Target Interaction Prediction.
Jinhang Wei, Yangbin Zhu, Linlin Zhuo, Yang Liu, Xiangzheng Fu

J Phys Chem Lett· August 2024

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ECD-CDGI: An efficient energy-constrained diffusion model for cancer driver gene identification.
Tao Wang, Linlin Zhuo, Yifan Chen, Xiangzheng Fu, Xiangxiang Zeng

PLoS Comput Biol· August 2024

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GAM-MDR: probing miRNA-drug resistance using a graph autoencoder based on random path masking.
Zhecheng Zhou, Zhenya Du, Xin Jiang, Linlin Zhuo, Yixin Xu

Brief Funct Genomics· July 2024

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GraphADT: empowering interpretable predictions of acute dermal toxicity with multi-view graph pooling and structure remapping.
Xinqian Ma, Xiangzheng Fu, Tao Wang, Linlin Zhuo, Quan Zou

Bioinformatics· July 2024

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Fusion of multi-source relationships and topology to infer lncRNA-protein interactions.
Xinyu Zhang, Mingzhe Liu, Zhen Li, Linlin Zhuo, Xiangzheng Fu

Mol Ther Nucleic Acids· June 2024

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Advancing cancer driver gene detection via Schur complement graph augmentation and independent subspace feature extraction.
Xinqian Ma, Zhen Li, Zhenya Du, Yan Xu, Yifan Chen, Linlin Zhuo

Comput Biol Med· May 2024

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Revisiting drug-protein interaction prediction: a novel global-local perspective.
Zhecheng Zhou, Qingquan Liao, Jinhang Wei, Linlin Zhuo, Xiaonan Wu

Bioinformatics· May 2024

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RFEM: A framework for essential microRNA identification in mice based on rotation forest and multiple feature fusion.
Shu-Hao Wang, Yan Zhao, Chun-Chun Wang, Fei Chu, Lian-Ying Miao, Linlin Zhuo

Comput Biol Med· March 2024

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MS-BACL: enhancing metabolic stability prediction through bond graph augmentation and contrastive learning.
Tao Wang, Zhen Li, Linlin Zhuo, Yifan Chen, Xiangzheng Fu

Brief Bioinform· March 2024

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Diff-AMP: tailored designed antimicrobial peptide framework with all-in-one generation, identification, prediction and optimization.
Rui Wang, Tao Wang, Linlin Zhuo, Jinhang Wei, Xiangzheng Fu

Brief Bioinform· January 2024

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