Publications by authors named "Logan Walker"

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BRCA1-, BRCA2-, and PALB2-related Fanconi anemia: Scope to expand disease phenotypic features and predict breast cancer risk in heterozygotes.
Sharon E Johnatty, Emma Tudini, Michael T Parsons, Kyriaki Michailidou, Maria Zanti, Logan C Walker

Am J Hum Genet· December 2025

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Specifications of the ACMG/AMP variant curation guidelines for the analysis of germline PALB2 sequence variants.
Marcy E Richardson, Megan F H Bishop, Megan A Holdren, Miguel de la Hoya, Amanda B Spurdle, Logan C Walker

Am J Hum Genet· October 2025

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Deep Learning Segmentation of Chromogenic Dye RNAscope From Breast Cancer Tissue.
Andrew Davidson, Arthur Morley-Bunker, George Wiggins, Logan Walker, Gavin Harris

J Imaging Inform Med· June 2025

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A parallelly distributed microscope and software system for scalable high-throughput multispectral 3D imaging.
Hehai Jiang, Logan A Walker, Ye Li, Bin Duan, Xiaoman Niu

bioRxiv· June 2025

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Analysis of , and related Fanconi anemia identifies scope to expand disease phenotypic features and predict breast cancer risk in heterozygotes.
Sharon E Johnatty, Emma Tudini, Michael T Parsons, Kyriaki Michailidou, Maria Zanti, Logan C Walker

medRxiv· May 2025

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Germline copy number variants and endometrial cancer risk.
Cassie E Stylianou, George A R Wiggins, Vanessa L Lau, Joe Dennis, Andrew N Shelling, Logan C Walker

Hum Genet· December 2024

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Specifications of the ACMG/AMP variant curation guidelines for the analysis of germline ATM sequence variants.
Marcy E Richardson, Megan Holdren, Terra Brannan, Miguel de la Hoya, Amanda B Spurdle, Logan C Walker

Am J Hum Genet· November 2024

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Evidence-based recommendations for gene-specific ACMG/AMP variant classification from the ClinGen ENIGMA BRCA1 and BRCA2 Variant Curation Expert Panel.
Michael T Parsons, Miguel de la Hoya, Marcy E Richardson, Emma Tudini, Michael Anderson, Logan C Walker

Am J Hum Genet· September 2024

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Specifications of the ACMG/AMP variant curation guidelines for the analysis of germline sequence variants.
Marcy E Richardson, Megan Holdren, Terra Brannan, Miguel de la Hoya, Amanda B Spurdle, Logan C Walker

medRxiv· May 2024

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Using the ACMG/AMP framework to capture evidence related to predicted and observed impact on splicing: Recommendations from the ClinGen SVI Splicing Subgroup.
Logan C Walker, Miguel de la Hoya, George A R Wiggins, Amanda Lindy, Lisa M Vincent

Am J Hum Genet· July 2023

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Analysis of BRCA1 and BRCA2 alternative splicing in predisposition to ovarian cancer.
Anna Jasiak, Magdalena Koczkowska, Maciej Stukan, Dariusz Wydra, Wojciech Biernat, Logan Walker

Exp Mol Pathol· April 2023

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Post-explant profiling of subcellular-scale carbon fiber intracortical electrodes and surrounding neurons enables modeling of recorded electrophysiology.
Joseph G Letner, Paras R Patel, Jung-Chien Hsieh, Israel M Smith Flores, Elena Della Valle, Logan A Walker

J Neural Eng· March 2023

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APPLICATION OF THE ACMG/AMP FRAMEWORK TO CAPTURE EVIDENCE RELEVANT TO PREDICTED AND OBSERVED IMPACT ON SPLICING: RECOMMENDATIONS FROM THE CLINGEN SVI SPLICING SUBGROUP.
Logan C Walker, Miguel de la Hoya, George A R Wiggins, Amanda Lindy, Lisa M Vincent

medRxiv· February 2023

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A Comparison of Lossless Compression Methods in Microscopy Data Storage Applications.
Logan A Walker, Maggie McGlothlin, Ye Li, Dawen Cai

bioRxiv· January 2023

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Clinical, splicing, and functional analysis to classify BRCA2 exon 3 variants: Application of a points-based ACMG/AMP approach.
Mads Thomassen, Romy L S Mesman, Thomas V O Hansen, Mireia Menendez, Maria Rossing, Logan C Walker

Hum Mutat· December 2022

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Copy number variants as modifiers of breast cancer risk for BRCA1/BRCA2 pathogenic variant carriers.
Christopher Hakkaart, John F Pearson, Louise Marquart, Joe Dennis, George A R Wiggins, Lisa Walker, Logan C Walker

Commun Biol· October 2022

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Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition.
Kanhaiya Singh, Yashika Rustagi, Ahmed S Abouhashem, Saba Tabasum, Priyanka Verma, Logan A Walker

J Clin Invest· September 2022

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nGauge: Integrated and Extensible Neuron Morphology Analysis in Python.
Logan A Walker, Jennifer S Williams, Ye Li, Douglas H Roossien, Wei Jie Lee

Neuroinformatics· July 2022

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Leukemia-initiating HSCs in chronic lymphocytic leukemia reveal clonal leukemogenesis and differential drug sensitivity.
Chi-Ling Chiang, Eileen Y Hu, Lingqian Chang, Jadwiga Labanowska, Kevan Zapolnik, Logan A Walker

Cell Rep· July 2022

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Characterization of an alloherpesvirus from wild lake sturgeon Acipenser fulvescens in Wisconsin (USA).
Logan Walker, Kuttichantran Subramaniam, Pedro H O Viadanna, Jordan A Vann, Susan Marcquenski

Dis Aquat Organ· June 2022

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PP2A is a therapeutically targetable driver of cell fate decisions via a c-Myc/p21 axis in human and murine acute myeloid leukemia.
Swagata Goswami, Rajeswaran Mani, Jessica Nunes, Chi-Ling Chiang, Kevan Zapolnik, Logan A Walker, Alison Walker

Blood· March 2022

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Bitbow Enables Highly Efficient Neuronal Lineage Tracing and Morphology Reconstruction in Single Brains.
Ye Li, Logan A Walker, Yimeng Zhao, Erica M Edwards, Nigel S Michki

Front Neural Circuits· January 2022

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Rare germline copy number variants (CNVs) and breast cancer risk.
Joe Dennis, Jonathan P Tyrer, Logan C Walker, Kyriaki Michailidou, Leila Dorling

Commun Biol· January 2022

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Robust Transcriptional Profiling and Identification of Differentially Expressed Genes With Low Input RNA Sequencing of Adult Hippocampal Neural Stem and Progenitor Populations.
Jiyeon K Denninger, Logan A Walker, Xi Chen, Altan Turkoglu, Alex Pan

Front Mol Neurosci· January 2022

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Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum.
Marlena Duda, Kelly L Sovacool, Negar Farzaneh, Vy Kim Nguyen, Sarah E Haynes, Logan A Walker

J Open Source Educ· December 2021

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