Publications by authors named "Luke McCarthy"

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Respiratory Bacteria and Antimicrobial Resistance Genes Detected by Long-Read Metagenomic Sequencing Following Feedlot Arrival, Subsequent Treatment Risk and Phenotypic Resistance in Feedlot Calves.
Jennifer N Abi Younes, Lianne McLeod, Stacey R Lacoste, Zhijian Chai, Emily K Herman, E Luke McCarthy

Antibiotics (Basel)· November 2025

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Evaluating the Diagnostic Performance of Long-Read Metagenomic Sequencing Compared to Culture and Antimicrobial Susceptibility Testing for Detection of Bovine Respiratory Bacteria and Indicators of Antimicrobial Resistance.
Jennifer N Abi Younes, Lianne McLeod, Simon J G Otto, Zhijian Chai, Stacey Lacoste, E Luke McCarthy

Antibiotics (Basel)· November 2025

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Bacterial enrichment prior to third-generation metagenomic sequencing improves detection of BRD pathogens and genetic determinants of antimicrobial resistance in feedlot cattle.
Emily K Herman, Stacey R Lacoste, Claire N Freeman, Simon J G Otto, E Luke McCarthy

Front Microbiol· May 2024

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Testing Models of Associations Between Depression and Parenting Self-efficacy in Mothers: A Meta-analytic Review.
Sherryl H Goodman, Hannah Simon, Luke McCarthy, Jeffrey Ziegler, Alex Ceballos

Clin Child Fam Psychol Rev· September 2022

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CaptureSeq: Hybridization-Based Enrichment of Gene Fragments Reveals the Community Structures of Synthetic and Natural Microbial Ecosystems.
Matthew G Links, Tim J Dumonceaux, E Luke McCarthy, Sean M Hemmingsen, Edward Topp

Microorganisms· April 2021

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Enrichment and identification of biosurfactant-producing oil field microbiota utilizing electron acceptors other than oxygen and nitrate.
Yuriy Kryachko, Diana Semler, John Vogrinetz, Markus Lemke, Matthew G Links, E Luke McCarthy

J Biotechnol· August 2016

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The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions.
Ben Vandervalk, E Luke McCarthy, José Cruz-Toledo, Artjom Klein, Christopher J O Baker

JMIR Res Protoc· April 2013

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The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies.
Toshiaki Katayama, Mark D Wilkinson, Gos Micklem, Shuichi Kawashima, Atsuko Yamaguchi, Luke McCarthy

J Biomed Semantics· February 2013

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Gemma: a resource for the reuse, sharing and meta-analysis of expression profiling data.
Anton Zoubarev, Kelsey M Hamer, Kiran D Keshav, E Luke McCarthy, Joseph Roy C Santos

Bioinformatics· September 2012

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SPARQL assist language-neutral query composer.
Luke McCarthy, Ben Vandervalk, Mark Wilkinson

BMC Bioinformatics· January 2012

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The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation.
Mark D Wilkinson, Benjamin Vandervalk, Luke McCarthy

J Biomed Semantics· October 2011

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The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications.
Toshiaki Katayama, Mark D Wilkinson, Rutger Vos, Takeshi Kawashima, Shuichi Kawashima, Luke McCarthy

J Biomed Semantics· August 2011

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SADI, SHARE, and the in silico scientific method.
Mark D Wilkinson, Luke McCarthy, Benjamin Vandervalk, David Withers, Edward Kawas

BMC Bioinformatics· December 2010

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Moby and Moby 2: creatures of the deep (web).
Ben P Vandervalk, E Luke McCarthy, Mark D Wilkinson

Brief Bioinform· March 2009

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