Publications by authors named "Mahmut Safak"

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Recent advances in discovery and functional analysis of the small proteins and microRNA expressed by polyomaviruses.
A Sami Saribas, Liselotte E Jensen, Mahmut Safak

Virology· January 2025

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JC virus small tumor antigen promotes S phase entry and cell cycle progression.
Renato Biffi, Stefanie W Benoit, Ilker K Sariyer, Mahmut Safak

Tumour Virus Res· December 2024

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Human neurotropic polyomavirus, JC virus, late coding region encodes a novel nuclear protein, ORF4, which targets the promyelocytic leukemia nuclear bodies (PML-NBs) and modulates their reorganization.
A Sami Saribas, Anna Bellizzi, Hassen S Wollebo, Thomas Beer, Hsin-Yao Tang, Mahmut Safak

Virology· October 2023

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Human neurotropic polyomavirus, JC virus, agnoprotein targets mitochondrion and modulates its functions.
Reshu Saxena, Sami Saribas, Pooja Jadiya, Dhanendra Tomar, Rafal Kaminski, Mahmut Safak

Virology· January 2021

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A Comprehensive Proteomics Analysis of the JC Virus (JCV) Large and Small Tumor Antigen Interacting Proteins: Large T Primarily Targets the Host Protein Complexes with V-ATPase and Ubiquitin Ligase Activities While Small t Mostly Associates with Those Having Phosphatase and Chromatin-Remodeling Functions.
Sami Saribas, Mahmut Safak

Viruses· October 2020

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A comprehensive proteomics analysis of JC virus Agnoprotein-interacting proteins: Agnoprotein primarily targets the host proteins with coiled-coil motifs.
A Sami Saribas, Prasun K Datta, Mahmut Safak

Virology· January 2020

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Expression of novel proteins by polyomaviruses and recent advances in the structural and functional features of agnoprotein of JC virus, BK virus, and simian virus 40.
A Sami Saribas, Pascale Coric, Serge Bouaziz, Mahmut Safak

J Cell Physiol· June 2019

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Discovery and characterization of novel trans-spliced products of human polyoma JC virus late transcripts from PML patients.
A Sami Saribas, Julia DeVoto, Akhil Golla, Hassen S Wollebo, Martyn K White, Mahmut Safak

J Cell Physiol· May 2018

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Structure-based release analysis of the JC virus agnoprotein regions: A role for the hydrophilic surface of the major alpha helix domain in release.
A Sami Saribas, Martyn K White, Mahmut Safak

J Cell Physiol· March 2018

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Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein.
Pascale Coric, A Sami Saribas, Magid Abou-Gharbia, Wayne Childers, Jon H Condra, Mahmut Safak

J Cell Biochem· October 2017

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Emerging From the Unknown: Structural and Functional Features of Agnoprotein of Polyomaviruses.
A Sami Saribas, Pascale Coric, Anahit Hamazaspyan, William Davis, Rachel Axman, Mahmut Safak

J Cell Physiol· October 2016

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The Brd4 acetyllysine-binding protein is involved in activation of polyomavirus JC.
Hassen S Wollebo, Anna Bellizzi, Dominique H Cossari, Julian Salkind, Mahmut Safak

J Neurovirol· October 2016

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Epigenetic regulation of polyomavirus JC involves acetylation of specific lysine residues in NF-κB p65.
Hassen S Wollebo, Anna Bellizzi, Dominique H Cossari, Mahmut Safak, Kamel Khalili

J Neurovirol· December 2015

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Nuclear magnetic resonance structure revealed that the human polyomavirus JC virus agnoprotein contains an α-helix encompassing the Leu/Ile/Phe-rich domain.
Pascale Coric, A Sami Saribas, Magid Abou-Gharbia, Wayne Childers, Martyn K White, Mahmut Safak

J Virol· June 2014

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Human polyoma JC virus minor capsid proteins, VP2 and VP3, enhance large T antigen binding to the origin of viral DNA replication: evidence for their involvement in regulation of the viral DNA replication.
A Sami Saribas, Sarah Mun, Jaslyn Johnson, Mohammad El-Hajmoussa, Martyn K White, Mahmut Safak

Virology· January 2014

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Essential roles of Leu/Ile/Phe-rich domain of JC virus agnoprotein in dimer/oligomer formation, protein stability and splicing of viral transcripts.
A Sami Saribas, Magid Abou-Gharbia, Wayne Childers, Ilker K Sariyer, Martyn K White, Mahmut Safak

Virology· August 2013

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Epigenetic regulation of polyomavirus JC.
Hassen S Wollebo, Baheru Woldemichaele, Kamel Khalili, Mahmut Safak, Martyn K White

Virol J· August 2013

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JC virus agnoprotein enhances large T antigen binding to the origin of viral DNA replication: evidence for its involvement in viral DNA replication.
A Sami Saribas, Martyn K White, Mahmut Safak

Virology· November 2012

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Cooperative roles of NF-κB and NFAT4 in polyomavirus JC regulation at the KB control element.
Hassen S Wollebo, Sonia Melis, Kamel Khalili, Mahmut Safak, Martyn K White

Virology· October 2012

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Human polyomavirus JC small regulatory agnoprotein forms highly stable dimers and oligomers: implications for their roles in agnoprotein function.
A Sami Saribas, Buenafe T Arachea, Martyn K White, Ronald E Viola, Mahmut Safak

Virology· November 2011

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Infection by agnoprotein-negative mutants of polyomavirus JC and SV40 results in the release of virions that are mostly deficient in DNA content.
Ilker K Sariyer, Abdullah S Saribas, Martyn K White, Mahmut Safak

Virol J· May 2011

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Role for tumor necrosis factor-α in JC virus reactivation and progressive multifocal leukoencephalopathy.
Hassen S Wollebo, Mahmut Safak, Luis Del Valle, Kamel Khalili, Martyn K White

J Neuroimmunol· April 2011

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JC virus-induced Progressive Multifocal Leukoencephalopathy.
A Sami Saribas, Ahmet Ozdemir, Cathy Lam, Mahmut Safak

Future Virol· May 2010

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Modulation of JC virus transcription by C/EBPbeta.
Luca Romagnoli, Hassen S Wollebo, Satish L Deshmane, Ruma Mukerjee, Luis Del Valle, Mahmut Safak

Virus Res· December 2009

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Regulation of gene expression in primate polyomaviruses.
Martyn K White, Mahmut Safak, Kamel Khalili

J Virol· November 2009

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