Publications by authors named "Mark D Preston"

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ETS factors are required but not sufficient for specific patterns of enhancer activity in different endothelial subtypes.
Alice Neal, Svanhild Nornes, Pakavarin Louphrasitthiphol, Natalia Sacilotto, Mark D Preston

Dev Biol· May 2021

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An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities.
Denise M O'Sullivan, Ronan M Doyle, Sasithon Temisak, Nicholas Redshaw, Alexandra S Whale, Mark D Preston

Sci Rep· May 2021

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Clostridium difficile clade 3 (RT023) have a modified cell surface and contain a large transposable island with novel cargo.
Helen Alexandra Shaw, Ladan Khodadoost, Mark D Preston, Jeroen Corver, Peter Mullany

Sci Rep· October 2019

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Pathway-Wide Genetic Risks in Chlamydial Infections Overlap between Tissue Tropisms: A Genome-Wide Association Scan.
Chrissy H Roberts, Sander Ouburg, Mark D Preston, Henry J C de Vries, Martin J Holland

Mediators Inflamm· October 2018

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Para-cresol production by Clostridium difficile affects microbial diversity and membrane integrity of Gram-negative bacteria.
Ian J Passmore, Marine P M Letertre, Mark D Preston, Irene Bianconi, Mark A Harrison

PLoS Pathog· September 2018

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Frequent Undetected Ward-Based Methicillin-Resistant Staphylococcus aureus Transmission Linked to Patient Sharing Between Hospitals.
Olga Tosas Auguet, Richard A Stabler, Jason Betley, Mark D Preston, Mandeep Dhaliwal

Clin Infect Dis· March 2018

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From FASTQ to Function: In Silico Methods for Processing Next-Generation Sequencing Data.
Mark D Preston, Richard A Stabler

Methods Mol Biol· January 2018

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The nature of the conserved basic amino acid sequences found among 437 heparin binding proteins determined by network analysis.
Timothy R Rudd, Mark D Preston, Edwin A Yates

Mol Biosyst· May 2017

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Development of a candidate reference material for adventitious virus detection in vaccine and biologicals manufacturing by deep sequencing.
Edward T Mee, Mark D Preston, Philip D Minor, Silke Schepelmann,

Vaccine· April 2016

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Population genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesi.
Samuel Assefa, Caeul Lim, Mark D Preston, Craig W Duffy, Mridul B Nair

Proc Natl Acad Sci U S A· October 2015

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Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences.
Francesc Coll, Ruth McNerney, Mark D Preston, José Afonso Guerra-Assunção, Andrew Warry

Genome Med· May 2015

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Imputation-based population genetics analysis of Plasmodium falciparum malaria parasites.
Hanif Samad, Francesc Coll, Mark D Preston, Harold Ocholla, Rick M Fairhurst

PLoS Genet· April 2015

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Whole-genome scans provide evidence of adaptive evolution in Malawian Plasmodium falciparum isolates.
Harold Ocholla, Mark D Preston, Mwapatsa Mipando, Anja T R Jensen, Susana Campino

J Infect Dis· December 2014

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SVAMP: sequence variation analysis, maps and phylogeny.
Raeece Naeem, Lailatul Hidayah, Mark D Preston, Taane G Clark, Arnab Pain

Bioinformatics· August 2014

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PlasmoView: a web-based resource to visualise global Plasmodium falciparum genomic variation.
Mark D Preston, Samuel A Assefa, Harold Ocholla, Colin J Sutherland, Steffen Borrmann

J Infect Dis· June 2014

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A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strains.
Mark D Preston, Susana Campino, Samuel A Assefa, Diego F Echeverry, Harold Ocholla

Nat Commun· June 2014

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estMOI: estimating multiplicity of infection using parasite deep sequencing data.
Samuel A Assefa, Mark D Preston, Susana Campino, Harold Ocholla, Colin J Sutherland

Bioinformatics· May 2014

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Utilising family-based designs for detecting rare variant disease associations.
Mark D Preston, Frank Dudbridge

Ann Hum Genet· March 2014

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VarB: a variation browsing and analysis tool for variants derived from next-generation sequencing data.
Mark D Preston, Magnus Manske, Neil Horner, Samuel Assefa, Susana Campino

Bioinformatics· November 2012

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SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences.
Francesc Coll, Kim Mallard, Mark D Preston, Stephen Bentley, Julian Parkhill

Bioinformatics· November 2012

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Evolutionary optimality in stochastic search problems.
Mark D Preston, Jonathan W Pitchford, A Jamie Wood

J R Soc Interface· September 2010

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