Publications by authors named "Mark Simons"

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Randomized Pragmatic Trial of the Comparative Effectiveness of Chicken Egg-Based Inactivated, Mammalian Cell Culture-Based Inactivated, and Recombinant Protein Quadrivalent Seasonal Influenza Vaccines in United States Military Health System Beneficiaries.
Rhonda E Colombo, Stephanie A Richard, Kat Schmidt, Christina Schofield, Anuradha Ganesan, Mark P Simons

Clin Infect Dis· December 2025

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The Epidemiology, Phylogeny, and Strain Antigenicity of an Influenza A/H3N2 Virus Outbreak Among Vaccinated US Navy Midshipmen.
Simon D Pollett, Emily Hone, Stephanie A Richard, Kat Schmidt, Mark P Simons

Influenza Other Respir Viruses· December 2025

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Clinical, Radiographic, and Physiological Correlates of Post-COVID-19 Dyspnea in Military Health System Beneficiaries: Results From the Chronic Impairment With Pulmonary Symptoms (ChIPS) Sub-study.
S Michael Goertzen, David A Lindholm, Robert J Walter, Nikhil A Huprikar, Anuradha Ganesan, Mark Simons

Open Forum Infect Dis· November 2025

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Precision Symptom Phenotyping Identifies Early Clinical and Proteomic Predictors of Distinct COVID-19 Sequelae.
Nusrat J Epsi, Josh G Chenoweth, Paul W Blair, David A Lindholm, Anuradha Ganesan, Mark P Simons

J Infect Dis· July 2025

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The infectious diseases clinical research program acute respiratory infection repository protocol: Opportunities to understand current and future epidemics.
Simon D Pollett, Rhonda E Colombo, Stephanie A Richard, Tahaniyat Lalani, Brianne Barton, Mark Simons

PLoS One· July 2025

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Assessment of Lyme Seroconversion Among US Military Personnel in Honduras.
Hua-Wei Chen, Victor A Sugiharto, Stephanie K Gatrell, Gabrielle R Blazek, Amanda M Cherry, Mark P Simons

Mil Med· June 2025

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Seraph 100 Hemoperfusion for Management of Severe COVID-19: Assessment of Serum and Plasma Analytes Pre- and Post-Filtration.
Michael Rouse, Eric R Gann, Joost Brandsma, Victor A Sugiharto, Henry Robertson, Mark P Simons

Blood Purif· April 2025

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Performance of rapid antigen tests to detect SARS-CoV-2 variant diversity and correlation with viral culture positivity: implication for diagnostic development and future public health strategies.
Heather Goux, Jennetta Green, Andrew Wilson, Shanmuga Sozhamannan, Stephanie A Richard, Mark P Simons

mBio· December 2024

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Lethal COVID-19 associates with RAAS-induced inflammation for multiple organ damage including mediastinal lymph nodes.
Michael J Topper, Joseph W Guarnieri, Jeffrey A Haltom, Amy Chadburn, Henry Cope, Mark P Simons

Proc Natl Acad Sci U S A· December 2024

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Automated and virus variant-programmable surrogate test qualitatively compares to the gold standard SARS-CoV-2 neutralization assay.
Danielle W Ali, Maggie L Bartlett, Christopher D Heger, Francisco Ramirez, Linwood Johnson, Mark P Simons

Npj Viruses· December 2024

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Estimating the Effect of Coronavirus Disease 2019 (COVID-19) Vaccination and Infection Variant on Post-COVID-19 Venous Thrombosis or Embolism Risk.
Andrew O'Carroll, Stephanie A Richard, Celia Byrne, Jennifer Rusiecki, Ben Wier, Mark P Simons

Open Forum Infect Dis· November 2024

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SARS-CoV-2 variant replacement constrains vaccine-specific viral diversification.
Bethany L Dearlove, Anthony C Fries, Nusrat J Epsi, Stephanie A Richard, Anuradha Ganesan, Mark P Simons

Virus Evol· September 2024

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Opportunities for Enhanced Public Health Surveillance via Molecular Detection and Sequencing of Diverse Respiratory Viruses From Self-collected SARS-CoV-2 Antigen Test Swabs.
Kat Schmidt, Simon D Pollett, Stephanie A Richard, Vivian Hogan, Emily Hone, Mark P Simons

Open Forum Infect Dis· August 2024

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SARS-CoV-2 infection is associated with self-reported post-acute neuropsychological symptoms within six months of follow-up.
Liana R Andronescu, Stephanie A Richard, Ann I Scher, David A Lindholm, Katrin Mende, Mark P Simons

PLoS One· April 2024

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Gut microbiome and antibiotic resistance effects during travelers' diarrhea treatment and prevention.
Kevin S Blake, Drew J Schwartz, Srinand Paruthiyil, Bin Wang, Jie Ning, Mark P Simons

mBio· January 2024

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Decreased Self-reported Physical Fitness Following SARS-CoV-2 Infection and the Impact of Vaccine Boosters in a Cohort Study.
Stephanie A Richard, Ann I Scher, Jennifer Rusiecki, Celia Byrne, Catherine M Berjohn, Mark P Simons

Open Forum Infect Dis· December 2023

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Evaluating SARS-CoV-2 Saliva and Dried Blood Spot Surveillance Strategies in a Congregate Population.
Liana R Andronescu, Stephanie A Richard, Eric D Laing, Nora Pisanic, Si'Ana A Coggins, Mark P Simons

Emerg Infect Dis· September 2023

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Host CD3 T-cells can significantly modulate phage treatment effects on bacterial bioburden in mouse models.
Renhua Li, Michael Rouse, Brendon T Pace, Scott F Grey, Kimberly Mclaughlin, Mark P Simons

Front Microbiol· September 2023

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Imaging Diverse Pathogenic Bacteria In Vivo with F-Fluoromannitol PET.
Spenser R Simpson, Alexandria E Kesterson, Justin H Wilde, Zoraiz Qureshi, Bijoy Kundu, Mark P Simons

J Nucl Med· May 2023

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A machine learning approach identifies distinct early-symptom cluster phenotypes which correlate with hospitalization, failure to return to activities, and prolonged COVID-19 symptoms.
Nusrat J Epsi, John H Powers, David A Lindholm, Katrin Mende, Allison Malloy, Mark P Simons

PLoS One· February 2023

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Species in Cambodia, Ghana, Laos, and Peru: Results from Vector and Serosurveys.
Kristin Mullins, Enrique Canal, Pidor Ouch, Didot Prasetyo, Janice Tagoe, Mark P Simons

Vector Borne Zoonotic Dis· January 2023

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Persistent COVID-19 Symptoms at 6 Months After Onset and the Role of Vaccination Before or After SARS-CoV-2 Infection.
Stephanie A Richard, Simon D Pollett, Anthony C Fries, Catherine M Berjohn, Ryan C Maves, Mark P Simons

JAMA Netw Open· January 2023

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Antigenic cartography of well-characterized human sera shows SARS-CoV-2 neutralization differences based on infection and vaccination history.
Wei Wang, Sabrina Lusvarghi, Rahul Subramanian, Nusrat J Epsi, Richard Wang, Mark P Simons

Cell Host Microbe· December 2022

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Impact of international travel and diarrhea on gut microbiome and resistome dynamics.
Manish Boolchandani, Kevin S Blake, Drake H Tilley, Miguel M Cabada, Drew J Schwartz, Mark P Simons

Nat Commun· December 2022

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Distinct blood inflammatory biomarker clusters stratify host phenotypes during the middle phase of COVID-19.
Paul W Blair, Joost Brandsma, Josh Chenoweth, Stephanie A Richard, Nusrat J Epsi, Mark P Simons

Sci Rep· December 2022

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